Gene : Pavir.5KG422700 P. virgatum v4.1
Defline:  (1 of 2) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Genomic Order:  4159
Name:  ? Pavir.5KG422700 Secondary Identifier:  ? PAC:37634590
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5837 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG422700 0.5kb upstream 0.5kb upstream 3873 true Chr05K: 82483956-82487828 Panicum virgatum
Pavir.5KG422700 0.5kb upstream 0.5kb upstream 500 false Chr05K: 82487329-82487828 Panicum virgatum
Pavir.5KG422700 0.5kb downstream 0.5kb downstream 3873 true Chr05K: 82483456-82487328 Panicum virgatum
Pavir.5KG422700 0.5kb downstream 0.5kb downstream 500 false Chr05K: 82483456-82483955 Panicum virgatum
Pavir.5KG422700 1.0kb upstream 1.0kb upstream 4373 true Chr05K: 82483956-82488328 Panicum virgatum
Pavir.5KG422700 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 82487329-82488328 Panicum virgatum
Pavir.5KG422700 1.0kb downstream 1.0kb downstream 4373 true Chr05K: 82482956-82487328 Panicum virgatum
Pavir.5KG422700 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 82482956-82483955 Panicum virgatum
Pavir.5KG422700 2.0kb upstream 2.0kb upstream 5373 true Chr05K: 82483956-82489328 Panicum virgatum
Pavir.5KG422700 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 82487329-82489328 Panicum virgatum
Pavir.5KG422700 2.0kb downstream 2.0kb downstream 5373 true Chr05K: 82481956-82487328 Panicum virgatum
Pavir.5KG422700 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 82481956-82483955 Panicum virgatum
Pavir.5KG422700 5.0kb upstream 5.0kb upstream 8373 true Chr05K: 82483956-82492328 Panicum virgatum
Pavir.5KG422700 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 82487329-82492328 Panicum virgatum
Pavir.5KG422700 5.0kb downstream 5.0kb downstream 8373 true Chr05K: 82478956-82487328 Panicum virgatum
Pavir.5KG422700 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 82478956-82483955 Panicum virgatum
Pavir.5KG422700 10.0kb upstream 10.0kb upstream 13373 true Chr05K: 82483956-82497328 Panicum virgatum
Pavir.5KG422700 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 82487329-82497328 Panicum virgatum
Pavir.5KG422700 10.0kb downstream 10.0kb downstream 13373 true Chr05K: 82473956-82487328 Panicum virgatum
Pavir.5KG422700 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 82473956-82483955 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122095148 5267 Panicoideae Singleton cluster - no MSA
124582324 5269 Grass View MSA
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain