Gene : Thecc1EG025083 T. cacao v1.1
Defline:  (1 of 119) PF00847 - AP2 domain (AP2) Genomic Order:  1869
Name:  ? Thecc1EG025083 Secondary Identifier:  ? PAC:27423633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025083 0.5kb upstream 0.5kb upstream 1117 true scaffold_5: 30562174-30563290 Theobroma cacao
Thecc1EG025083 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 30562174-30562673 Theobroma cacao
Thecc1EG025083 0.5kb downstream 0.5kb downstream 1117 true scaffold_5: 30562674-30563790 Theobroma cacao
Thecc1EG025083 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 30563291-30563790 Theobroma cacao
Thecc1EG025083 1.0kb upstream 1.0kb upstream 1617 true scaffold_5: 30561674-30563290 Theobroma cacao
Thecc1EG025083 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 30561674-30562673 Theobroma cacao
Thecc1EG025083 1.0kb downstream 1.0kb downstream 1617 true scaffold_5: 30562674-30564290 Theobroma cacao
Thecc1EG025083 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 30563291-30564290 Theobroma cacao
Thecc1EG025083 2.0kb upstream 2.0kb upstream 2617 true scaffold_5: 30560674-30563290 Theobroma cacao
Thecc1EG025083 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 30560674-30562673 Theobroma cacao
Thecc1EG025083 2.0kb downstream 2.0kb downstream 2617 true scaffold_5: 30562674-30565290 Theobroma cacao
Thecc1EG025083 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 30563291-30565290 Theobroma cacao
Thecc1EG025083 5.0kb upstream 5.0kb upstream 5617 true scaffold_5: 30557674-30563290 Theobroma cacao
Thecc1EG025083 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 30557674-30562673 Theobroma cacao
Thecc1EG025083 5.0kb downstream 5.0kb downstream 5617 true scaffold_5: 30562674-30568290 Theobroma cacao
Thecc1EG025083 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 30563291-30568290 Theobroma cacao
Thecc1EG025083 10.0kb upstream 10.0kb upstream 10617 true scaffold_5: 30552674-30563290 Theobroma cacao
Thecc1EG025083 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 30552674-30562673 Theobroma cacao
Thecc1EG025083 10.0kb downstream 10.0kb downstream 10617 true scaffold_5: 30562674-30573290 Theobroma cacao
Thecc1EG025083 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 30563291-30573290 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820164 5264 Brassicales-Malvales Singleton cluster - no MSA
124316386 5266 SBM Singleton cluster - no MSA
124165211 5268 Malvidae Singleton cluster - no MSA
124071566 5270 Rosid View MSA
123753406 5271 Pentapetalae View MSA
122775094 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain