Gene : Pavir.5KG481400 P. virgatum v4.1
Defline:  (1 of 2) PTHR10791//PTHR10791:SF54 - RAG1-ACTIVATING PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  4540
Name:  ? Pavir.5KG481400 Secondary Identifier:  ? PAC:37634522
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG481400 0.5kb upstream 0.5kb upstream 2246 true Chr05K: 90839388-90841633 Panicum virgatum
Pavir.5KG481400 0.5kb upstream 0.5kb upstream 500 false Chr05K: 90841134-90841633 Panicum virgatum
Pavir.5KG481400 0.5kb downstream 0.5kb downstream 2246 true Chr05K: 90838888-90841133 Panicum virgatum
Pavir.5KG481400 0.5kb downstream 0.5kb downstream 500 false Chr05K: 90838888-90839387 Panicum virgatum
Pavir.5KG481400 1.0kb upstream 1.0kb upstream 2746 true Chr05K: 90839388-90842133 Panicum virgatum
Pavir.5KG481400 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 90841134-90842133 Panicum virgatum
Pavir.5KG481400 1.0kb downstream 1.0kb downstream 2746 true Chr05K: 90838388-90841133 Panicum virgatum
Pavir.5KG481400 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 90838388-90839387 Panicum virgatum
Pavir.5KG481400 2.0kb upstream 2.0kb upstream 3746 true Chr05K: 90839388-90843133 Panicum virgatum
Pavir.5KG481400 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 90841134-90843133 Panicum virgatum
Pavir.5KG481400 2.0kb downstream 2.0kb downstream 3746 true Chr05K: 90837388-90841133 Panicum virgatum
Pavir.5KG481400 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 90837388-90839387 Panicum virgatum
Pavir.5KG481400 5.0kb upstream 5.0kb upstream 6746 true Chr05K: 90839388-90846133 Panicum virgatum
Pavir.5KG481400 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 90841134-90846133 Panicum virgatum
Pavir.5KG481400 5.0kb downstream 5.0kb downstream 6746 true Chr05K: 90834388-90841133 Panicum virgatum
Pavir.5KG481400 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 90834388-90839387 Panicum virgatum
Pavir.5KG481400 10.0kb upstream 10.0kb upstream 11746 true Chr05K: 90839388-90851133 Panicum virgatum
Pavir.5KG481400 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 90841134-90851133 Panicum virgatum
Pavir.5KG481400 10.0kb downstream 10.0kb downstream 11746 true Chr05K: 90829388-90841133 Panicum virgatum
Pavir.5KG481400 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 90829388-90839387 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189878 5267 Panicoideae View MSA
124571013 5269 Grass View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain