Gene : Pavir.5KG459500 P. virgatum v4.1
Defline:  (1 of 2) PTHR23076:SF40 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  3822
Name:  ? Pavir.5KG459500 Secondary Identifier:  ? PAC:37636795
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG459500 0.5kb upstream 0.5kb upstream 7945 true Chr05K: 78400205-78408149 Panicum virgatum
Pavir.5KG459500 0.5kb upstream 0.5kb upstream 500 false Chr05K: 78400205-78400704 Panicum virgatum
Pavir.5KG459500 0.5kb downstream 0.5kb downstream 7945 true Chr05K: 78400705-78408649 Panicum virgatum
Pavir.5KG459500 0.5kb downstream 0.5kb downstream 500 false Chr05K: 78408150-78408649 Panicum virgatum
Pavir.5KG459500 1.0kb upstream 1.0kb upstream 8445 true Chr05K: 78399705-78408149 Panicum virgatum
Pavir.5KG459500 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 78399705-78400704 Panicum virgatum
Pavir.5KG459500 1.0kb downstream 1.0kb downstream 8445 true Chr05K: 78400705-78409149 Panicum virgatum
Pavir.5KG459500 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 78408150-78409149 Panicum virgatum
Pavir.5KG459500 2.0kb upstream 2.0kb upstream 9445 true Chr05K: 78398705-78408149 Panicum virgatum
Pavir.5KG459500 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 78398705-78400704 Panicum virgatum
Pavir.5KG459500 2.0kb downstream 2.0kb downstream 9445 true Chr05K: 78400705-78410149 Panicum virgatum
Pavir.5KG459500 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 78408150-78410149 Panicum virgatum
Pavir.5KG459500 5.0kb upstream 5.0kb upstream 12445 true Chr05K: 78395705-78408149 Panicum virgatum
Pavir.5KG459500 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 78395705-78400704 Panicum virgatum
Pavir.5KG459500 5.0kb downstream 5.0kb downstream 12445 true Chr05K: 78400705-78413149 Panicum virgatum
Pavir.5KG459500 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 78408150-78413149 Panicum virgatum
Pavir.5KG459500 10.0kb upstream 10.0kb upstream 17445 true Chr05K: 78390705-78408149 Panicum virgatum
Pavir.5KG459500 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 78390705-78400704 Panicum virgatum
Pavir.5KG459500 10.0kb downstream 10.0kb downstream 17445 true Chr05K: 78400705-78418149 Panicum virgatum
Pavir.5KG459500 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 78408150-78418149 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181541 5267 Panicoideae View MSA
124571042 5269 Grass View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain