Gene : Pavir.5KG451400 P. virgatum v4.1
Defline:  (1 of 5) PTHR10992//PTHR10992:SF782 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3896
Name:  ? Pavir.5KG451400 Secondary Identifier:  ? PAC:37639152
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum LIPAS-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG451400 0.5kb upstream 0.5kb upstream 3004 true Chr05K: 78939771-78942774 Panicum virgatum
Pavir.5KG451400 0.5kb upstream 0.5kb upstream 500 false Chr05K: 78939771-78940270 Panicum virgatum
Pavir.5KG451400 0.5kb downstream 0.5kb downstream 3004 true Chr05K: 78940271-78943274 Panicum virgatum
Pavir.5KG451400 0.5kb downstream 0.5kb downstream 500 false Chr05K: 78942775-78943274 Panicum virgatum
Pavir.5KG451400 1.0kb upstream 1.0kb upstream 3504 true Chr05K: 78939271-78942774 Panicum virgatum
Pavir.5KG451400 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 78939271-78940270 Panicum virgatum
Pavir.5KG451400 1.0kb downstream 1.0kb downstream 3504 true Chr05K: 78940271-78943774 Panicum virgatum
Pavir.5KG451400 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 78942775-78943774 Panicum virgatum
Pavir.5KG451400 2.0kb upstream 2.0kb upstream 4504 true Chr05K: 78938271-78942774 Panicum virgatum
Pavir.5KG451400 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 78938271-78940270 Panicum virgatum
Pavir.5KG451400 2.0kb downstream 2.0kb downstream 4504 true Chr05K: 78940271-78944774 Panicum virgatum
Pavir.5KG451400 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 78942775-78944774 Panicum virgatum
Pavir.5KG451400 5.0kb upstream 5.0kb upstream 7504 true Chr05K: 78935271-78942774 Panicum virgatum
Pavir.5KG451400 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 78935271-78940270 Panicum virgatum
Pavir.5KG451400 5.0kb downstream 5.0kb downstream 7504 true Chr05K: 78940271-78947774 Panicum virgatum
Pavir.5KG451400 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 78942775-78947774 Panicum virgatum
Pavir.5KG451400 10.0kb upstream 10.0kb upstream 12504 true Chr05K: 78930271-78942774 Panicum virgatum
Pavir.5KG451400 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 78930271-78940270 Panicum virgatum
Pavir.5KG451400 10.0kb downstream 10.0kb downstream 12504 true Chr05K: 78940271-78952774 Panicum virgatum
Pavir.5KG451400 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 78942775-78952774 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180756 5267 Panicoideae View MSA
124578231 5269 Grass View MSA
122043617 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain