Gene : Pavir.5KG546000 P. virgatum v4.1
Defline:  (1 of 2) PTHR10055:SF9 - PROTEIN OVULE ABORTION 4 Genomic Order:  4958
Name:  ? Pavir.5KG546000 Secondary Identifier:  ? PAC:37637265
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG546000 0.5kb upstream 0.5kb upstream 6002 true Chr05K: 94453434-94459435 Panicum virgatum
Pavir.5KG546000 0.5kb upstream 0.5kb upstream 500 false Chr05K: 94458936-94459435 Panicum virgatum
Pavir.5KG546000 0.5kb downstream 0.5kb downstream 6002 true Chr05K: 94452934-94458935 Panicum virgatum
Pavir.5KG546000 0.5kb downstream 0.5kb downstream 500 false Chr05K: 94452934-94453433 Panicum virgatum
Pavir.5KG546000 1.0kb upstream 1.0kb upstream 6502 true Chr05K: 94453434-94459935 Panicum virgatum
Pavir.5KG546000 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 94458936-94459935 Panicum virgatum
Pavir.5KG546000 1.0kb downstream 1.0kb downstream 6502 true Chr05K: 94452434-94458935 Panicum virgatum
Pavir.5KG546000 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 94452434-94453433 Panicum virgatum
Pavir.5KG546000 2.0kb upstream 2.0kb upstream 7502 true Chr05K: 94453434-94460935 Panicum virgatum
Pavir.5KG546000 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 94458936-94460935 Panicum virgatum
Pavir.5KG546000 2.0kb downstream 2.0kb downstream 7502 true Chr05K: 94451434-94458935 Panicum virgatum
Pavir.5KG546000 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 94451434-94453433 Panicum virgatum
Pavir.5KG546000 5.0kb upstream 5.0kb upstream 10502 true Chr05K: 94453434-94463935 Panicum virgatum
Pavir.5KG546000 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 94458936-94463935 Panicum virgatum
Pavir.5KG546000 5.0kb downstream 5.0kb downstream 10502 true Chr05K: 94448434-94458935 Panicum virgatum
Pavir.5KG546000 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 94448434-94453433 Panicum virgatum
Pavir.5KG546000 10.0kb upstream 10.0kb upstream 15502 true Chr05K: 94453434-94468935 Panicum virgatum
Pavir.5KG546000 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 94458936-94468935 Panicum virgatum
Pavir.5KG546000 10.0kb downstream 10.0kb downstream 15502 true Chr05K: 94443434-94458935 Panicum virgatum
Pavir.5KG546000 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 94443434-94453433 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194918 5267 Panicoideae View MSA
124576484 5269 Grass View MSA
122047133 5273 Angiosperm View MSA
121345289 5274 Embryophyte View MSA
123423978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain