Gene : Thecc1EG025033 T. cacao v1.1

Defline:  (1 of 1) K03252 - translation initiation factor 3 subunit C (EIF3C) Genomic Order:  1826
Name:  ? Thecc1EG025033 Secondary Identifier:  ? PAC:27421369

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025033 0.5kb upstream 0.5kb upstream 4887 true scaffold_5: 30277764-30282650 Theobroma cacao
Thecc1EG025033 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 30282151-30282650 Theobroma cacao
Thecc1EG025033 0.5kb downstream 0.5kb downstream 4887 true scaffold_5: 30277264-30282150 Theobroma cacao
Thecc1EG025033 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 30277264-30277763 Theobroma cacao
Thecc1EG025033 1.0kb upstream 1.0kb upstream 5387 true scaffold_5: 30277764-30283150 Theobroma cacao
Thecc1EG025033 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 30282151-30283150 Theobroma cacao
Thecc1EG025033 1.0kb downstream 1.0kb downstream 5387 true scaffold_5: 30276764-30282150 Theobroma cacao
Thecc1EG025033 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 30276764-30277763 Theobroma cacao
Thecc1EG025033 2.0kb upstream 2.0kb upstream 6387 true scaffold_5: 30277764-30284150 Theobroma cacao
Thecc1EG025033 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 30282151-30284150 Theobroma cacao
Thecc1EG025033 2.0kb downstream 2.0kb downstream 6387 true scaffold_5: 30275764-30282150 Theobroma cacao
Thecc1EG025033 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 30275764-30277763 Theobroma cacao
Thecc1EG025033 5.0kb upstream 5.0kb upstream 9387 true scaffold_5: 30277764-30287150 Theobroma cacao
Thecc1EG025033 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 30282151-30287150 Theobroma cacao
Thecc1EG025033 5.0kb downstream 5.0kb downstream 9387 true scaffold_5: 30272764-30282150 Theobroma cacao
Thecc1EG025033 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 30272764-30277763 Theobroma cacao
Thecc1EG025033 10.0kb upstream 10.0kb upstream 14387 true scaffold_5: 30277764-30292150 Theobroma cacao
Thecc1EG025033 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 30282151-30292150 Theobroma cacao
Thecc1EG025033 10.0kb downstream 10.0kb downstream 14387 true scaffold_5: 30267764-30282150 Theobroma cacao
Thecc1EG025033 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 30267764-30277763 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835366 5264 Brassicales-Malvales View MSA
124336438 5266 SBM View MSA
124247250 5268 Malvidae View MSA
124064059 5270 Rosid View MSA
123748906 5271 Pentapetalae View MSA
122796222 5272 Eudicot View MSA
122042650 5273 Angiosperm View MSA
121345410 5274 Embryophyte View MSA
123424846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain