Gene : Thecc1EG024993 T. cacao v1.1
Defline:  (1 of 2) PTHR33830//PTHR33830:SF3 - FAMILY NOT NAMED // DEFENSIN-LIKE PROTEIN 122-RELATED Genomic Order:  1794
Name:  ? Thecc1EG024993 Secondary Identifier:  ? PAC:27423254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024993 0.5kb upstream 0.5kb upstream 6057 true scaffold_5: 29953239-29959295 Theobroma cacao
Thecc1EG024993 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29953239-29953738 Theobroma cacao
Thecc1EG024993 0.5kb downstream 0.5kb downstream 6057 true scaffold_5: 29953739-29959795 Theobroma cacao
Thecc1EG024993 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29959296-29959795 Theobroma cacao
Thecc1EG024993 1.0kb upstream 1.0kb upstream 6557 true scaffold_5: 29952739-29959295 Theobroma cacao
Thecc1EG024993 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29952739-29953738 Theobroma cacao
Thecc1EG024993 1.0kb downstream 1.0kb downstream 6557 true scaffold_5: 29953739-29960295 Theobroma cacao
Thecc1EG024993 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29959296-29960295 Theobroma cacao
Thecc1EG024993 2.0kb upstream 2.0kb upstream 7557 true scaffold_5: 29951739-29959295 Theobroma cacao
Thecc1EG024993 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29951739-29953738 Theobroma cacao
Thecc1EG024993 2.0kb downstream 2.0kb downstream 7557 true scaffold_5: 29953739-29961295 Theobroma cacao
Thecc1EG024993 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29959296-29961295 Theobroma cacao
Thecc1EG024993 5.0kb upstream 5.0kb upstream 10557 true scaffold_5: 29948739-29959295 Theobroma cacao
Thecc1EG024993 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29948739-29953738 Theobroma cacao
Thecc1EG024993 5.0kb downstream 5.0kb downstream 10557 true scaffold_5: 29953739-29964295 Theobroma cacao
Thecc1EG024993 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29959296-29964295 Theobroma cacao
Thecc1EG024993 10.0kb upstream 10.0kb upstream 15557 true scaffold_5: 29943739-29959295 Theobroma cacao
Thecc1EG024993 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29943739-29953738 Theobroma cacao
Thecc1EG024993 10.0kb downstream 10.0kb downstream 15557 true scaffold_5: 29953739-29969295 Theobroma cacao
Thecc1EG024993 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29959296-29969295 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
123836573 5264 Brassicales-Malvales View MSA
124322184 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain