Gene : Pavir.5KG685500 P. virgatum v4.1
Defline:  (1 of 5) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  6238
Name:  ? Pavir.5KG685500 Secondary Identifier:  ? PAC:37634906
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6902 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG685500 0.5kb upstream 0.5kb upstream 7920 true Chr05K: 107067715-107075634 Panicum virgatum
Pavir.5KG685500 0.5kb upstream 0.5kb upstream 500 false Chr05K: 107075135-107075634 Panicum virgatum
Pavir.5KG685500 0.5kb downstream 0.5kb downstream 7920 true Chr05K: 107067215-107075134 Panicum virgatum
Pavir.5KG685500 0.5kb downstream 0.5kb downstream 500 false Chr05K: 107067215-107067714 Panicum virgatum
Pavir.5KG685500 1.0kb upstream 1.0kb upstream 8420 true Chr05K: 107067715-107076134 Panicum virgatum
Pavir.5KG685500 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 107075135-107076134 Panicum virgatum
Pavir.5KG685500 1.0kb downstream 1.0kb downstream 8420 true Chr05K: 107066715-107075134 Panicum virgatum
Pavir.5KG685500 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 107066715-107067714 Panicum virgatum
Pavir.5KG685500 2.0kb upstream 2.0kb upstream 9420 true Chr05K: 107067715-107077134 Panicum virgatum
Pavir.5KG685500 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 107075135-107077134 Panicum virgatum
Pavir.5KG685500 2.0kb downstream 2.0kb downstream 9420 true Chr05K: 107065715-107075134 Panicum virgatum
Pavir.5KG685500 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 107065715-107067714 Panicum virgatum
Pavir.5KG685500 5.0kb upstream 5.0kb upstream 12420 true Chr05K: 107067715-107080134 Panicum virgatum
Pavir.5KG685500 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 107075135-107080134 Panicum virgatum
Pavir.5KG685500 5.0kb downstream 5.0kb downstream 12420 true Chr05K: 107062715-107075134 Panicum virgatum
Pavir.5KG685500 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 107062715-107067714 Panicum virgatum
Pavir.5KG685500 10.0kb upstream 10.0kb upstream 17420 true Chr05K: 107067715-107085134 Panicum virgatum
Pavir.5KG685500 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 107075135-107085134 Panicum virgatum
Pavir.5KG685500 10.0kb downstream 10.0kb downstream 17420 true Chr05K: 107057715-107075134 Panicum virgatum
Pavir.5KG685500 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 107057715-107067714 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179982 5267 Panicoideae View MSA
124571085 5269 Grass View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain