Gene : Pavir.5KG652300 P. virgatum v4.1
Defline:  (1 of 1) K02527 - 3-deoxy-D-manno-octulosonic-acid transferase (kdtA, waaA) Genomic Order:  5934
Name:  ? Pavir.5KG652300 Secondary Identifier:  ? PAC:37636800
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum KDOSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG652300 0.5kb upstream 0.5kb upstream 4655 true Chr05K: 104683966-104688620 Panicum virgatum
Pavir.5KG652300 0.5kb upstream 0.5kb upstream 500 false Chr05K: 104688121-104688620 Panicum virgatum
Pavir.5KG652300 0.5kb downstream 0.5kb downstream 4655 true Chr05K: 104683466-104688120 Panicum virgatum
Pavir.5KG652300 0.5kb downstream 0.5kb downstream 500 false Chr05K: 104683466-104683965 Panicum virgatum
Pavir.5KG652300 1.0kb upstream 1.0kb upstream 5155 true Chr05K: 104683966-104689120 Panicum virgatum
Pavir.5KG652300 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 104688121-104689120 Panicum virgatum
Pavir.5KG652300 1.0kb downstream 1.0kb downstream 5155 true Chr05K: 104682966-104688120 Panicum virgatum
Pavir.5KG652300 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 104682966-104683965 Panicum virgatum
Pavir.5KG652300 2.0kb upstream 2.0kb upstream 6155 true Chr05K: 104683966-104690120 Panicum virgatum
Pavir.5KG652300 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 104688121-104690120 Panicum virgatum
Pavir.5KG652300 2.0kb downstream 2.0kb downstream 6155 true Chr05K: 104681966-104688120 Panicum virgatum
Pavir.5KG652300 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 104681966-104683965 Panicum virgatum
Pavir.5KG652300 5.0kb upstream 5.0kb upstream 9155 true Chr05K: 104683966-104693120 Panicum virgatum
Pavir.5KG652300 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 104688121-104693120 Panicum virgatum
Pavir.5KG652300 5.0kb downstream 5.0kb downstream 9155 true Chr05K: 104678966-104688120 Panicum virgatum
Pavir.5KG652300 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 104678966-104683965 Panicum virgatum
Pavir.5KG652300 10.0kb upstream 10.0kb upstream 14155 true Chr05K: 104683966-104698120 Panicum virgatum
Pavir.5KG652300 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 104688121-104698120 Panicum virgatum
Pavir.5KG652300 10.0kb downstream 10.0kb downstream 14155 true Chr05K: 104673966-104688120 Panicum virgatum
Pavir.5KG652300 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 104673966-104683965 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185332 5267 Panicoideae View MSA
124575901 5269 Grass View MSA
122042607 5273 Angiosperm View MSA
121344444 5274 Embryophyte View MSA
123380045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain