Gene : Pavir.5KG718300 P. virgatum v4.1
Defline:  (1 of 2) PTHR21250:SF0 - PRE-RRNA-PROCESSING PROTEIN TSR2 HOMOLOG Genomic Order:  6545
Name:  ? Pavir.5KG718300 Secondary Identifier:  ? PAC:37632485
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG718300 0.5kb upstream 0.5kb upstream 3862 true Chr05K: 110416430-110420291 Panicum virgatum
Pavir.5KG718300 0.5kb upstream 0.5kb upstream 500 false Chr05K: 110416430-110416929 Panicum virgatum
Pavir.5KG718300 0.5kb downstream 0.5kb downstream 3862 true Chr05K: 110416930-110420791 Panicum virgatum
Pavir.5KG718300 0.5kb downstream 0.5kb downstream 500 false Chr05K: 110420292-110420791 Panicum virgatum
Pavir.5KG718300 1.0kb upstream 1.0kb upstream 4362 true Chr05K: 110415930-110420291 Panicum virgatum
Pavir.5KG718300 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 110415930-110416929 Panicum virgatum
Pavir.5KG718300 1.0kb downstream 1.0kb downstream 4362 true Chr05K: 110416930-110421291 Panicum virgatum
Pavir.5KG718300 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 110420292-110421291 Panicum virgatum
Pavir.5KG718300 2.0kb upstream 2.0kb upstream 5362 true Chr05K: 110414930-110420291 Panicum virgatum
Pavir.5KG718300 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 110414930-110416929 Panicum virgatum
Pavir.5KG718300 2.0kb downstream 2.0kb downstream 5362 true Chr05K: 110416930-110422291 Panicum virgatum
Pavir.5KG718300 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 110420292-110422291 Panicum virgatum
Pavir.5KG718300 5.0kb upstream 5.0kb upstream 8362 true Chr05K: 110411930-110420291 Panicum virgatum
Pavir.5KG718300 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 110411930-110416929 Panicum virgatum
Pavir.5KG718300 5.0kb downstream 5.0kb downstream 8362 true Chr05K: 110416930-110425291 Panicum virgatum
Pavir.5KG718300 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 110420292-110425291 Panicum virgatum
Pavir.5KG718300 10.0kb upstream 10.0kb upstream 13362 true Chr05K: 110406930-110420291 Panicum virgatum
Pavir.5KG718300 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 110406930-110416929 Panicum virgatum
Pavir.5KG718300 10.0kb downstream 10.0kb downstream 13362 true Chr05K: 110416930-110430291 Panicum virgatum
Pavir.5KG718300 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 110420292-110430291 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029524 5273 Angiosperm View MSA
122197851 5267 Panicoideae View MSA
124585578 5269 Grass View MSA
121298842 5274 Embryophyte View MSA
123336784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain