Gene : Pavir.5KG777100 P. virgatum v4.1
Defline:  (1 of 3) K00791 - tRNA dimethylallyltransferase (miaA, TRIT1) Genomic Order:  7086
Name:  ? Pavir.5KG777100 Secondary Identifier:  ? PAC:37634992
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-2781 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG777100 0.5kb upstream 0.5kb upstream 3371 true Chr05K: 115741165-115744535 Panicum virgatum
Pavir.5KG777100 0.5kb upstream 0.5kb upstream 500 false Chr05K: 115741165-115741664 Panicum virgatum
Pavir.5KG777100 0.5kb downstream 0.5kb downstream 3371 true Chr05K: 115741665-115745035 Panicum virgatum
Pavir.5KG777100 0.5kb downstream 0.5kb downstream 500 false Chr05K: 115744536-115745035 Panicum virgatum
Pavir.5KG777100 1.0kb upstream 1.0kb upstream 3871 true Chr05K: 115740665-115744535 Panicum virgatum
Pavir.5KG777100 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 115740665-115741664 Panicum virgatum
Pavir.5KG777100 1.0kb downstream 1.0kb downstream 3871 true Chr05K: 115741665-115745535 Panicum virgatum
Pavir.5KG777100 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 115744536-115745535 Panicum virgatum
Pavir.5KG777100 2.0kb upstream 2.0kb upstream 4871 true Chr05K: 115739665-115744535 Panicum virgatum
Pavir.5KG777100 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 115739665-115741664 Panicum virgatum
Pavir.5KG777100 2.0kb downstream 2.0kb downstream 4871 true Chr05K: 115741665-115746535 Panicum virgatum
Pavir.5KG777100 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 115744536-115746535 Panicum virgatum
Pavir.5KG777100 5.0kb upstream 5.0kb upstream 7871 true Chr05K: 115736665-115744535 Panicum virgatum
Pavir.5KG777100 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 115736665-115741664 Panicum virgatum
Pavir.5KG777100 5.0kb downstream 5.0kb downstream 7871 true Chr05K: 115741665-115749535 Panicum virgatum
Pavir.5KG777100 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 115744536-115749535 Panicum virgatum
Pavir.5KG777100 10.0kb upstream 10.0kb upstream 12871 true Chr05K: 115731665-115744535 Panicum virgatum
Pavir.5KG777100 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 115731665-115741664 Panicum virgatum
Pavir.5KG777100 10.0kb downstream 10.0kb downstream 12871 true Chr05K: 115741665-115754535 Panicum virgatum
Pavir.5KG777100 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 115744536-115754535 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185785 5267 Panicoideae View MSA
124578987 5269 Grass View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain