Gene : Pavir.5KG775800 P. virgatum v4.1
Defline:  (1 of 2) PTHR11851//PTHR11851:SF141 - METALLOPROTEASE // SUBFAMILY NOT NAMED Genomic Order:  7073
Name:  ? Pavir.5KG775800 Secondary Identifier:  ? PAC:37637569
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-3781 Panicum virgatum pathologic  
Pvirgatum PWY-7279 Panicum virgatum pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG775800 0.5kb upstream 0.5kb upstream 4301 true Chr05K: 115679539-115683839 Panicum virgatum
Pavir.5KG775800 0.5kb upstream 0.5kb upstream 500 false Chr05K: 115679539-115680038 Panicum virgatum
Pavir.5KG775800 0.5kb downstream 0.5kb downstream 4301 true Chr05K: 115680039-115684339 Panicum virgatum
Pavir.5KG775800 0.5kb downstream 0.5kb downstream 500 false Chr05K: 115683840-115684339 Panicum virgatum
Pavir.5KG775800 1.0kb upstream 1.0kb upstream 4801 true Chr05K: 115679039-115683839 Panicum virgatum
Pavir.5KG775800 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 115679039-115680038 Panicum virgatum
Pavir.5KG775800 1.0kb downstream 1.0kb downstream 4801 true Chr05K: 115680039-115684839 Panicum virgatum
Pavir.5KG775800 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 115683840-115684839 Panicum virgatum
Pavir.5KG775800 2.0kb upstream 2.0kb upstream 5801 true Chr05K: 115678039-115683839 Panicum virgatum
Pavir.5KG775800 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 115678039-115680038 Panicum virgatum
Pavir.5KG775800 2.0kb downstream 2.0kb downstream 5801 true Chr05K: 115680039-115685839 Panicum virgatum
Pavir.5KG775800 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 115683840-115685839 Panicum virgatum
Pavir.5KG775800 5.0kb upstream 5.0kb upstream 8801 true Chr05K: 115675039-115683839 Panicum virgatum
Pavir.5KG775800 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 115675039-115680038 Panicum virgatum
Pavir.5KG775800 5.0kb downstream 5.0kb downstream 8801 true Chr05K: 115680039-115688839 Panicum virgatum
Pavir.5KG775800 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 115683840-115688839 Panicum virgatum
Pavir.5KG775800 10.0kb upstream 10.0kb upstream 13801 true Chr05K: 115670039-115683839 Panicum virgatum
Pavir.5KG775800 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 115670039-115680038 Panicum virgatum
Pavir.5KG775800 10.0kb downstream 10.0kb downstream 13801 true Chr05K: 115680039-115693839 Panicum virgatum
Pavir.5KG775800 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 115683840-115693839 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187396 5267 Panicoideae View MSA
124577730 5269 Grass View MSA
122050410 5273 Angiosperm View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain