Gene : Thecc1EG025253 T. cacao v1.1
Defline:  (1 of 2) K02699 - photosystem I subunit XI (psaL) Genomic Order:  2002
Name:  ? Thecc1EG025253 Secondary Identifier:  ? PAC:27425007
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-101 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025253 0.5kb upstream 0.5kb upstream 2764 true scaffold_5: 31501392-31504155 Theobroma cacao
Thecc1EG025253 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 31501392-31501891 Theobroma cacao
Thecc1EG025253 0.5kb downstream 0.5kb downstream 2764 true scaffold_5: 31501892-31504655 Theobroma cacao
Thecc1EG025253 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 31504156-31504655 Theobroma cacao
Thecc1EG025253 1.0kb upstream 1.0kb upstream 3264 true scaffold_5: 31500892-31504155 Theobroma cacao
Thecc1EG025253 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 31500892-31501891 Theobroma cacao
Thecc1EG025253 1.0kb downstream 1.0kb downstream 3264 true scaffold_5: 31501892-31505155 Theobroma cacao
Thecc1EG025253 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 31504156-31505155 Theobroma cacao
Thecc1EG025253 2.0kb upstream 2.0kb upstream 4264 true scaffold_5: 31499892-31504155 Theobroma cacao
Thecc1EG025253 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 31499892-31501891 Theobroma cacao
Thecc1EG025253 2.0kb downstream 2.0kb downstream 4264 true scaffold_5: 31501892-31506155 Theobroma cacao
Thecc1EG025253 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 31504156-31506155 Theobroma cacao
Thecc1EG025253 5.0kb upstream 5.0kb upstream 7264 true scaffold_5: 31496892-31504155 Theobroma cacao
Thecc1EG025253 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 31496892-31501891 Theobroma cacao
Thecc1EG025253 5.0kb downstream 5.0kb downstream 7264 true scaffold_5: 31501892-31509155 Theobroma cacao
Thecc1EG025253 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 31504156-31509155 Theobroma cacao
Thecc1EG025253 10.0kb upstream 10.0kb upstream 12264 true scaffold_5: 31491892-31504155 Theobroma cacao
Thecc1EG025253 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 31491892-31501891 Theobroma cacao
Thecc1EG025253 10.0kb downstream 10.0kb downstream 12264 true scaffold_5: 31501892-31514155 Theobroma cacao
Thecc1EG025253 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 31504156-31514155 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
123838077 5264 Brassicales-Malvales View MSA
124343130 5266 SBM View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain