Gene : Thecc1EG025257 T. cacao v1.1
Defline:  (1 of 1) PTHR12608:SF4 - GDT1-LIKE PROTEIN 3 Genomic Order:  2006
Name:  ? Thecc1EG025257 Secondary Identifier:  ? PAC:27421688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025257 0.5kb upstream 0.5kb upstream 5441 true scaffold_5: 31513138-31518578 Theobroma cacao
Thecc1EG025257 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 31518079-31518578 Theobroma cacao
Thecc1EG025257 0.5kb downstream 0.5kb downstream 5441 true scaffold_5: 31512638-31518078 Theobroma cacao
Thecc1EG025257 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 31512638-31513137 Theobroma cacao
Thecc1EG025257 1.0kb upstream 1.0kb upstream 5941 true scaffold_5: 31513138-31519078 Theobroma cacao
Thecc1EG025257 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 31518079-31519078 Theobroma cacao
Thecc1EG025257 1.0kb downstream 1.0kb downstream 5941 true scaffold_5: 31512138-31518078 Theobroma cacao
Thecc1EG025257 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 31512138-31513137 Theobroma cacao
Thecc1EG025257 2.0kb upstream 2.0kb upstream 6941 true scaffold_5: 31513138-31520078 Theobroma cacao
Thecc1EG025257 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 31518079-31520078 Theobroma cacao
Thecc1EG025257 2.0kb downstream 2.0kb downstream 6941 true scaffold_5: 31511138-31518078 Theobroma cacao
Thecc1EG025257 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 31511138-31513137 Theobroma cacao
Thecc1EG025257 5.0kb upstream 5.0kb upstream 9941 true scaffold_5: 31513138-31523078 Theobroma cacao
Thecc1EG025257 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 31518079-31523078 Theobroma cacao
Thecc1EG025257 5.0kb downstream 5.0kb downstream 9941 true scaffold_5: 31508138-31518078 Theobroma cacao
Thecc1EG025257 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 31508138-31513137 Theobroma cacao
Thecc1EG025257 10.0kb upstream 10.0kb upstream 14941 true scaffold_5: 31513138-31528078 Theobroma cacao
Thecc1EG025257 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 31518079-31528078 Theobroma cacao
Thecc1EG025257 10.0kb downstream 10.0kb downstream 14941 true scaffold_5: 31503138-31518078 Theobroma cacao
Thecc1EG025257 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 31503138-31513137 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829657 5264 Brassicales-Malvales View MSA
124337727 5266 SBM View MSA
124248081 5268 Malvidae View MSA
124066638 5270 Rosid View MSA
123740452 5271 Pentapetalae View MSA
122788674 5272 Eudicot View MSA
122047998 5273 Angiosperm View MSA
121345967 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain