Gene : Thecc1EG025214 T. cacao v1.1
Defline:  (1 of 3) PTHR10209//PTHR10209:SF176 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1971
Name:  ? Thecc1EG025214 Secondary Identifier:  ? PAC:27424074
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025214 0.5kb upstream 0.5kb upstream 19601 true scaffold_5: 31285535-31305135 Theobroma cacao
Thecc1EG025214 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 31285535-31286034 Theobroma cacao
Thecc1EG025214 0.5kb downstream 0.5kb downstream 19601 true scaffold_5: 31286035-31305635 Theobroma cacao
Thecc1EG025214 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 31305136-31305635 Theobroma cacao
Thecc1EG025214 1.0kb upstream 1.0kb upstream 20101 true scaffold_5: 31285035-31305135 Theobroma cacao
Thecc1EG025214 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 31285035-31286034 Theobroma cacao
Thecc1EG025214 1.0kb downstream 1.0kb downstream 20101 true scaffold_5: 31286035-31306135 Theobroma cacao
Thecc1EG025214 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 31305136-31306135 Theobroma cacao
Thecc1EG025214 2.0kb upstream 2.0kb upstream 21101 true scaffold_5: 31284035-31305135 Theobroma cacao
Thecc1EG025214 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 31284035-31286034 Theobroma cacao
Thecc1EG025214 2.0kb downstream 2.0kb downstream 21101 true scaffold_5: 31286035-31307135 Theobroma cacao
Thecc1EG025214 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 31305136-31307135 Theobroma cacao
Thecc1EG025214 5.0kb upstream 5.0kb upstream 24101 true scaffold_5: 31281035-31305135 Theobroma cacao
Thecc1EG025214 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 31281035-31286034 Theobroma cacao
Thecc1EG025214 5.0kb downstream 5.0kb downstream 24101 true scaffold_5: 31286035-31310135 Theobroma cacao
Thecc1EG025214 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 31305136-31310135 Theobroma cacao
Thecc1EG025214 10.0kb upstream 10.0kb upstream 29101 true scaffold_5: 31276035-31305135 Theobroma cacao
Thecc1EG025214 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 31276035-31286034 Theobroma cacao
Thecc1EG025214 10.0kb downstream 10.0kb downstream 29101 true scaffold_5: 31286035-31315135 Theobroma cacao
Thecc1EG025214 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 31305136-31315135 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825327 5264 Brassicales-Malvales View MSA
124351035 5266 SBM View MSA
124245698 5268 Malvidae View MSA
124070161 5270 Rosid View MSA
123753331 5271 Pentapetalae View MSA
122797647 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain