Gene : Thecc1EG025218 T. cacao v1.1
Defline:  (1 of 3) PTHR10209//PTHR10209:SF176 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1974
Name:  ? Thecc1EG025218 Secondary Identifier:  ? PAC:27424509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025218 0.5kb upstream 0.5kb upstream 2573 true scaffold_5: 31302568-31305140 Theobroma cacao
Thecc1EG025218 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 31302568-31303067 Theobroma cacao
Thecc1EG025218 0.5kb downstream 0.5kb downstream 2573 true scaffold_5: 31303068-31305640 Theobroma cacao
Thecc1EG025218 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 31305141-31305640 Theobroma cacao
Thecc1EG025218 1.0kb upstream 1.0kb upstream 3073 true scaffold_5: 31302068-31305140 Theobroma cacao
Thecc1EG025218 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 31302068-31303067 Theobroma cacao
Thecc1EG025218 1.0kb downstream 1.0kb downstream 3073 true scaffold_5: 31303068-31306140 Theobroma cacao
Thecc1EG025218 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 31305141-31306140 Theobroma cacao
Thecc1EG025218 2.0kb upstream 2.0kb upstream 4073 true scaffold_5: 31301068-31305140 Theobroma cacao
Thecc1EG025218 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 31301068-31303067 Theobroma cacao
Thecc1EG025218 2.0kb downstream 2.0kb downstream 4073 true scaffold_5: 31303068-31307140 Theobroma cacao
Thecc1EG025218 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 31305141-31307140 Theobroma cacao
Thecc1EG025218 5.0kb upstream 5.0kb upstream 7073 true scaffold_5: 31298068-31305140 Theobroma cacao
Thecc1EG025218 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 31298068-31303067 Theobroma cacao
Thecc1EG025218 5.0kb downstream 5.0kb downstream 7073 true scaffold_5: 31303068-31310140 Theobroma cacao
Thecc1EG025218 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 31305141-31310140 Theobroma cacao
Thecc1EG025218 10.0kb upstream 10.0kb upstream 12073 true scaffold_5: 31293068-31305140 Theobroma cacao
Thecc1EG025218 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 31293068-31303067 Theobroma cacao
Thecc1EG025218 10.0kb downstream 10.0kb downstream 12073 true scaffold_5: 31303068-31315140 Theobroma cacao
Thecc1EG025218 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 31305141-31315140 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825327 5264 Brassicales-Malvales View MSA
124351035 5266 SBM View MSA
124245698 5268 Malvidae View MSA
124070161 5270 Rosid View MSA
123753331 5271 Pentapetalae View MSA
122797647 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain