Gene : Pavir.2NG047500 P. virgatum v4.1
Defline:  (1 of 12) PTHR23024//PTHR23024:SF162 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // SUBFAMILY NOT NAMED Genomic Order:  441
Name:  ? Pavir.2NG047500 Secondary Identifier:  ? PAC:37584681
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6303 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG047500 0.5kb upstream 0.5kb upstream 1825 true Chr02N: 6346018-6347842 Panicum virgatum
Pavir.2NG047500 0.5kb upstream 0.5kb upstream 500 false Chr02N: 6347343-6347842 Panicum virgatum
Pavir.2NG047500 0.5kb downstream 0.5kb downstream 1825 true Chr02N: 6345518-6347342 Panicum virgatum
Pavir.2NG047500 0.5kb downstream 0.5kb downstream 500 false Chr02N: 6345518-6346017 Panicum virgatum
Pavir.2NG047500 1.0kb upstream 1.0kb upstream 2325 true Chr02N: 6346018-6348342 Panicum virgatum
Pavir.2NG047500 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 6347343-6348342 Panicum virgatum
Pavir.2NG047500 1.0kb downstream 1.0kb downstream 2325 true Chr02N: 6345018-6347342 Panicum virgatum
Pavir.2NG047500 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 6345018-6346017 Panicum virgatum
Pavir.2NG047500 2.0kb upstream 2.0kb upstream 3325 true Chr02N: 6346018-6349342 Panicum virgatum
Pavir.2NG047500 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 6347343-6349342 Panicum virgatum
Pavir.2NG047500 2.0kb downstream 2.0kb downstream 3325 true Chr02N: 6344018-6347342 Panicum virgatum
Pavir.2NG047500 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 6344018-6346017 Panicum virgatum
Pavir.2NG047500 5.0kb upstream 5.0kb upstream 6325 true Chr02N: 6346018-6352342 Panicum virgatum
Pavir.2NG047500 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 6347343-6352342 Panicum virgatum
Pavir.2NG047500 5.0kb downstream 5.0kb downstream 6325 true Chr02N: 6341018-6347342 Panicum virgatum
Pavir.2NG047500 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 6341018-6346017 Panicum virgatum
Pavir.2NG047500 10.0kb upstream 10.0kb upstream 11325 true Chr02N: 6346018-6357342 Panicum virgatum
Pavir.2NG047500 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 6347343-6357342 Panicum virgatum
Pavir.2NG047500 10.0kb downstream 10.0kb downstream 11325 true Chr02N: 6336018-6347342 Panicum virgatum
Pavir.2NG047500 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 6336018-6346017 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183341 5267 Panicoideae View MSA
124584166 5269 Grass View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain