Gene : Pavir.2NG024400 P. virgatum v4.1
Defline:  (1 of 3) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) Genomic Order:  226
Name:  ? Pavir.2NG024400 Secondary Identifier:  ? PAC:37586389
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5046 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG024400 0.5kb upstream 0.5kb upstream 5093 true Chr02N: 3780925-3786017 Panicum virgatum
Pavir.2NG024400 0.5kb upstream 0.5kb upstream 500 false Chr02N: 3785518-3786017 Panicum virgatum
Pavir.2NG024400 0.5kb downstream 0.5kb downstream 5093 true Chr02N: 3780425-3785517 Panicum virgatum
Pavir.2NG024400 0.5kb downstream 0.5kb downstream 500 false Chr02N: 3780425-3780924 Panicum virgatum
Pavir.2NG024400 1.0kb upstream 1.0kb upstream 5593 true Chr02N: 3780925-3786517 Panicum virgatum
Pavir.2NG024400 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 3785518-3786517 Panicum virgatum
Pavir.2NG024400 1.0kb downstream 1.0kb downstream 5593 true Chr02N: 3779925-3785517 Panicum virgatum
Pavir.2NG024400 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 3779925-3780924 Panicum virgatum
Pavir.2NG024400 2.0kb upstream 2.0kb upstream 6593 true Chr02N: 3780925-3787517 Panicum virgatum
Pavir.2NG024400 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 3785518-3787517 Panicum virgatum
Pavir.2NG024400 2.0kb downstream 2.0kb downstream 6593 true Chr02N: 3778925-3785517 Panicum virgatum
Pavir.2NG024400 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 3778925-3780924 Panicum virgatum
Pavir.2NG024400 5.0kb upstream 5.0kb upstream 9593 true Chr02N: 3780925-3790517 Panicum virgatum
Pavir.2NG024400 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 3785518-3790517 Panicum virgatum
Pavir.2NG024400 5.0kb downstream 5.0kb downstream 9593 true Chr02N: 3775925-3785517 Panicum virgatum
Pavir.2NG024400 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 3775925-3780924 Panicum virgatum
Pavir.2NG024400 10.0kb upstream 10.0kb upstream 14593 true Chr02N: 3780925-3795517 Panicum virgatum
Pavir.2NG024400 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 3785518-3795517 Panicum virgatum
Pavir.2NG024400 10.0kb downstream 10.0kb downstream 14593 true Chr02N: 3770925-3785517 Panicum virgatum
Pavir.2NG024400 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 3770925-3780924 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195911 5267 Panicoideae View MSA
124570574 5269 Grass View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain