Gene : Pavir.2NG016600 P. virgatum v4.1
Defline:  (1 of 3) PTHR14732:SF0 - RNA POLYMERASE II SUBUNIT B1 CTD PHOSPHATASE RPAP2-RELATED Genomic Order:  157
Name:  ? Pavir.2NG016600 Secondary Identifier:  ? PAC:37582727
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG016600 0.5kb upstream 0.5kb upstream 3373 true Chr02N: 1746473-1749845 Panicum virgatum
Pavir.2NG016600 0.5kb upstream 0.5kb upstream 500 false Chr02N: 1746473-1746972 Panicum virgatum
Pavir.2NG016600 0.5kb downstream 0.5kb downstream 3373 true Chr02N: 1746973-1750345 Panicum virgatum
Pavir.2NG016600 0.5kb downstream 0.5kb downstream 500 false Chr02N: 1749846-1750345 Panicum virgatum
Pavir.2NG016600 1.0kb upstream 1.0kb upstream 3873 true Chr02N: 1745973-1749845 Panicum virgatum
Pavir.2NG016600 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 1745973-1746972 Panicum virgatum
Pavir.2NG016600 1.0kb downstream 1.0kb downstream 3873 true Chr02N: 1746973-1750845 Panicum virgatum
Pavir.2NG016600 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 1749846-1750845 Panicum virgatum
Pavir.2NG016600 2.0kb upstream 2.0kb upstream 4873 true Chr02N: 1744973-1749845 Panicum virgatum
Pavir.2NG016600 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 1744973-1746972 Panicum virgatum
Pavir.2NG016600 2.0kb downstream 2.0kb downstream 4873 true Chr02N: 1746973-1751845 Panicum virgatum
Pavir.2NG016600 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 1749846-1751845 Panicum virgatum
Pavir.2NG016600 5.0kb upstream 5.0kb upstream 7873 true Chr02N: 1741973-1749845 Panicum virgatum
Pavir.2NG016600 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 1741973-1746972 Panicum virgatum
Pavir.2NG016600 5.0kb downstream 5.0kb downstream 7873 true Chr02N: 1746973-1754845 Panicum virgatum
Pavir.2NG016600 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 1749846-1754845 Panicum virgatum
Pavir.2NG016600 10.0kb upstream 10.0kb upstream 12873 true Chr02N: 1736973-1749845 Panicum virgatum
Pavir.2NG016600 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 1736973-1746972 Panicum virgatum
Pavir.2NG016600 10.0kb downstream 10.0kb downstream 12873 true Chr02N: 1746973-1759845 Panicum virgatum
Pavir.2NG016600 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 1749846-1759845 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175553 5267 Panicoideae View MSA
124572985 5269 Grass View MSA
122046248 5273 Angiosperm View MSA
121347996 5274 Embryophyte View MSA
123426503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain