Gene : Thecc1EG025174 T. cacao v1.1
Defline:  (1 of 2) PTHR13832//PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  1937
Name:  ? Thecc1EG025174 Secondary Identifier:  ? PAC:27422825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025174 0.5kb upstream 0.5kb upstream 7001 true scaffold_5: 31086995-31093995 Theobroma cacao
Thecc1EG025174 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 31093496-31093995 Theobroma cacao
Thecc1EG025174 0.5kb downstream 0.5kb downstream 7001 true scaffold_5: 31086495-31093495 Theobroma cacao
Thecc1EG025174 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 31086495-31086994 Theobroma cacao
Thecc1EG025174 1.0kb upstream 1.0kb upstream 7501 true scaffold_5: 31086995-31094495 Theobroma cacao
Thecc1EG025174 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 31093496-31094495 Theobroma cacao
Thecc1EG025174 1.0kb downstream 1.0kb downstream 7501 true scaffold_5: 31085995-31093495 Theobroma cacao
Thecc1EG025174 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 31085995-31086994 Theobroma cacao
Thecc1EG025174 2.0kb upstream 2.0kb upstream 8501 true scaffold_5: 31086995-31095495 Theobroma cacao
Thecc1EG025174 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 31093496-31095495 Theobroma cacao
Thecc1EG025174 2.0kb downstream 2.0kb downstream 8501 true scaffold_5: 31084995-31093495 Theobroma cacao
Thecc1EG025174 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 31084995-31086994 Theobroma cacao
Thecc1EG025174 5.0kb upstream 5.0kb upstream 11501 true scaffold_5: 31086995-31098495 Theobroma cacao
Thecc1EG025174 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 31093496-31098495 Theobroma cacao
Thecc1EG025174 5.0kb downstream 5.0kb downstream 11501 true scaffold_5: 31081995-31093495 Theobroma cacao
Thecc1EG025174 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 31081995-31086994 Theobroma cacao
Thecc1EG025174 10.0kb upstream 10.0kb upstream 16501 true scaffold_5: 31086995-31103495 Theobroma cacao
Thecc1EG025174 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 31093496-31103495 Theobroma cacao
Thecc1EG025174 10.0kb downstream 10.0kb downstream 16501 true scaffold_5: 31076995-31093495 Theobroma cacao
Thecc1EG025174 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 31076995-31086994 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840579 5264 Brassicales-Malvales View MSA
124344827 5266 SBM View MSA
124240209 5268 Malvidae View MSA
124068066 5270 Rosid View MSA
123751353 5271 Pentapetalae View MSA
122793781 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain