Gene : Pavir.2NG085300 P. virgatum v4.1
Defline:  (1 of 12) PTHR23024//PTHR23024:SF162 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // SUBFAMILY NOT NAMED Genomic Order:  786
Name:  ? Pavir.2NG085300 Secondary Identifier:  ? PAC:37584134
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6303 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG085300 0.5kb upstream 0.5kb upstream 1553 true Chr02N: 11695584-11697136 Panicum virgatum
Pavir.2NG085300 0.5kb upstream 0.5kb upstream 500 false Chr02N: 11695584-11696083 Panicum virgatum
Pavir.2NG085300 0.5kb downstream 0.5kb downstream 1553 true Chr02N: 11696084-11697636 Panicum virgatum
Pavir.2NG085300 0.5kb downstream 0.5kb downstream 500 false Chr02N: 11697137-11697636 Panicum virgatum
Pavir.2NG085300 1.0kb upstream 1.0kb upstream 2053 true Chr02N: 11695084-11697136 Panicum virgatum
Pavir.2NG085300 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 11695084-11696083 Panicum virgatum
Pavir.2NG085300 1.0kb downstream 1.0kb downstream 2053 true Chr02N: 11696084-11698136 Panicum virgatum
Pavir.2NG085300 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 11697137-11698136 Panicum virgatum
Pavir.2NG085300 2.0kb upstream 2.0kb upstream 3053 true Chr02N: 11694084-11697136 Panicum virgatum
Pavir.2NG085300 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 11694084-11696083 Panicum virgatum
Pavir.2NG085300 2.0kb downstream 2.0kb downstream 3053 true Chr02N: 11696084-11699136 Panicum virgatum
Pavir.2NG085300 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 11697137-11699136 Panicum virgatum
Pavir.2NG085300 5.0kb upstream 5.0kb upstream 6053 true Chr02N: 11691084-11697136 Panicum virgatum
Pavir.2NG085300 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 11691084-11696083 Panicum virgatum
Pavir.2NG085300 5.0kb downstream 5.0kb downstream 6053 true Chr02N: 11696084-11702136 Panicum virgatum
Pavir.2NG085300 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 11697137-11702136 Panicum virgatum
Pavir.2NG085300 10.0kb upstream 10.0kb upstream 11053 true Chr02N: 11686084-11697136 Panicum virgatum
Pavir.2NG085300 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 11686084-11696083 Panicum virgatum
Pavir.2NG085300 10.0kb downstream 10.0kb downstream 11053 true Chr02N: 11696084-11707136 Panicum virgatum
Pavir.2NG085300 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 11697137-11707136 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122081465 5267 Panicoideae Singleton cluster - no MSA
124584166 5269 Grass View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain