Gene : Pavir.2NG048600 P. virgatum v4.1
Defline:  (1 of 2) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  450
Name:  ? Pavir.2NG048600 Secondary Identifier:  ? PAC:37581201
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG048600 0.5kb upstream 0.5kb upstream 6165 true Chr02N: 6479435-6485599 Panicum virgatum
Pavir.2NG048600 0.5kb upstream 0.5kb upstream 500 false Chr02N: 6479435-6479934 Panicum virgatum
Pavir.2NG048600 0.5kb downstream 0.5kb downstream 6165 true Chr02N: 6479935-6486099 Panicum virgatum
Pavir.2NG048600 0.5kb downstream 0.5kb downstream 500 false Chr02N: 6485600-6486099 Panicum virgatum
Pavir.2NG048600 1.0kb upstream 1.0kb upstream 6665 true Chr02N: 6478935-6485599 Panicum virgatum
Pavir.2NG048600 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 6478935-6479934 Panicum virgatum
Pavir.2NG048600 1.0kb downstream 1.0kb downstream 6665 true Chr02N: 6479935-6486599 Panicum virgatum
Pavir.2NG048600 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 6485600-6486599 Panicum virgatum
Pavir.2NG048600 2.0kb upstream 2.0kb upstream 7665 true Chr02N: 6477935-6485599 Panicum virgatum
Pavir.2NG048600 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 6477935-6479934 Panicum virgatum
Pavir.2NG048600 2.0kb downstream 2.0kb downstream 7665 true Chr02N: 6479935-6487599 Panicum virgatum
Pavir.2NG048600 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 6485600-6487599 Panicum virgatum
Pavir.2NG048600 5.0kb upstream 5.0kb upstream 10665 true Chr02N: 6474935-6485599 Panicum virgatum
Pavir.2NG048600 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 6474935-6479934 Panicum virgatum
Pavir.2NG048600 5.0kb downstream 5.0kb downstream 10665 true Chr02N: 6479935-6490599 Panicum virgatum
Pavir.2NG048600 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 6485600-6490599 Panicum virgatum
Pavir.2NG048600 10.0kb upstream 10.0kb upstream 15665 true Chr02N: 6469935-6485599 Panicum virgatum
Pavir.2NG048600 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 6469935-6479934 Panicum virgatum
Pavir.2NG048600 10.0kb downstream 10.0kb downstream 15665 true Chr02N: 6479935-6495599 Panicum virgatum
Pavir.2NG048600 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 6485600-6495599 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179040 5267 Panicoideae View MSA
124581859 5269 Grass View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain