Gene : Pavir.2NG127100 P. virgatum v4.1
Defline:  (1 of 11) K06617 - raffinose synthase (E2.4.1.82) Genomic Order:  1169
Name:  ? Pavir.2NG127100 Secondary Identifier:  ? PAC:37581289
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5337 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG127100 0.5kb upstream 0.5kb upstream 3648 true Chr02N: 19121861-19125508 Panicum virgatum
Pavir.2NG127100 0.5kb upstream 0.5kb upstream 500 false Chr02N: 19125009-19125508 Panicum virgatum
Pavir.2NG127100 0.5kb downstream 0.5kb downstream 3648 true Chr02N: 19121361-19125008 Panicum virgatum
Pavir.2NG127100 0.5kb downstream 0.5kb downstream 500 false Chr02N: 19121361-19121860 Panicum virgatum
Pavir.2NG127100 1.0kb upstream 1.0kb upstream 4148 true Chr02N: 19121861-19126008 Panicum virgatum
Pavir.2NG127100 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 19125009-19126008 Panicum virgatum
Pavir.2NG127100 1.0kb downstream 1.0kb downstream 4148 true Chr02N: 19120861-19125008 Panicum virgatum
Pavir.2NG127100 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 19120861-19121860 Panicum virgatum
Pavir.2NG127100 2.0kb upstream 2.0kb upstream 5148 true Chr02N: 19121861-19127008 Panicum virgatum
Pavir.2NG127100 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 19125009-19127008 Panicum virgatum
Pavir.2NG127100 2.0kb downstream 2.0kb downstream 5148 true Chr02N: 19119861-19125008 Panicum virgatum
Pavir.2NG127100 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 19119861-19121860 Panicum virgatum
Pavir.2NG127100 5.0kb upstream 5.0kb upstream 8148 true Chr02N: 19121861-19130008 Panicum virgatum
Pavir.2NG127100 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 19125009-19130008 Panicum virgatum
Pavir.2NG127100 5.0kb downstream 5.0kb downstream 8148 true Chr02N: 19116861-19125008 Panicum virgatum
Pavir.2NG127100 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 19116861-19121860 Panicum virgatum
Pavir.2NG127100 10.0kb upstream 10.0kb upstream 13148 true Chr02N: 19121861-19135008 Panicum virgatum
Pavir.2NG127100 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 19125009-19135008 Panicum virgatum
Pavir.2NG127100 10.0kb downstream 10.0kb downstream 13148 true Chr02N: 19111861-19125008 Panicum virgatum
Pavir.2NG127100 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 19111861-19121860 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178143 5267 Panicoideae View MSA
124578254 5269 Grass View MSA
122044208 5273 Angiosperm View MSA
123429020 5275 Viridiplantae View MSA
121345613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain