Gene : Thecc1EG025535 T. cacao v1.1
Defline:  (1 of 95) PTHR23155//PTHR23155:SF563 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2206
Name:  ? Thecc1EG025535 Secondary Identifier:  ? PAC:27422471
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025535 0.5kb upstream 0.5kb upstream 5400 true scaffold_5: 33281616-33287015 Theobroma cacao
Thecc1EG025535 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 33281616-33282115 Theobroma cacao
Thecc1EG025535 0.5kb downstream 0.5kb downstream 5400 true scaffold_5: 33282116-33287515 Theobroma cacao
Thecc1EG025535 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 33287016-33287515 Theobroma cacao
Thecc1EG025535 1.0kb upstream 1.0kb upstream 5900 true scaffold_5: 33281116-33287015 Theobroma cacao
Thecc1EG025535 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 33281116-33282115 Theobroma cacao
Thecc1EG025535 1.0kb downstream 1.0kb downstream 5900 true scaffold_5: 33282116-33288015 Theobroma cacao
Thecc1EG025535 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 33287016-33288015 Theobroma cacao
Thecc1EG025535 2.0kb upstream 2.0kb upstream 6900 true scaffold_5: 33280116-33287015 Theobroma cacao
Thecc1EG025535 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 33280116-33282115 Theobroma cacao
Thecc1EG025535 2.0kb downstream 2.0kb downstream 6900 true scaffold_5: 33282116-33289015 Theobroma cacao
Thecc1EG025535 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 33287016-33289015 Theobroma cacao
Thecc1EG025535 5.0kb upstream 5.0kb upstream 9900 true scaffold_5: 33277116-33287015 Theobroma cacao
Thecc1EG025535 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 33277116-33282115 Theobroma cacao
Thecc1EG025535 5.0kb downstream 5.0kb downstream 9900 true scaffold_5: 33282116-33292015 Theobroma cacao
Thecc1EG025535 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 33287016-33292015 Theobroma cacao
Thecc1EG025535 10.0kb upstream 10.0kb upstream 14900 true scaffold_5: 33272116-33287015 Theobroma cacao
Thecc1EG025535 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 33272116-33282115 Theobroma cacao
Thecc1EG025535 10.0kb downstream 10.0kb downstream 14900 true scaffold_5: 33282116-33297015 Theobroma cacao
Thecc1EG025535 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 33287016-33297015 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839312 5264 Brassicales-Malvales View MSA
124351123 5266 SBM View MSA
124253634 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain