Gene : Thecc1EG025515 T. cacao v1.1
Defline:  (1 of 1) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Genomic Order:  2188
Name:  ? Thecc1EG025515 Secondary Identifier:  ? PAC:27424260
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025515 0.5kb upstream 0.5kb upstream 16657 true scaffold_5: 33148398-33165054 Theobroma cacao
Thecc1EG025515 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 33148398-33148897 Theobroma cacao
Thecc1EG025515 0.5kb downstream 0.5kb downstream 16657 true scaffold_5: 33148898-33165554 Theobroma cacao
Thecc1EG025515 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 33165055-33165554 Theobroma cacao
Thecc1EG025515 1.0kb upstream 1.0kb upstream 17157 true scaffold_5: 33147898-33165054 Theobroma cacao
Thecc1EG025515 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 33147898-33148897 Theobroma cacao
Thecc1EG025515 1.0kb downstream 1.0kb downstream 17157 true scaffold_5: 33148898-33166054 Theobroma cacao
Thecc1EG025515 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 33165055-33166054 Theobroma cacao
Thecc1EG025515 2.0kb upstream 2.0kb upstream 18157 true scaffold_5: 33146898-33165054 Theobroma cacao
Thecc1EG025515 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 33146898-33148897 Theobroma cacao
Thecc1EG025515 2.0kb downstream 2.0kb downstream 18157 true scaffold_5: 33148898-33167054 Theobroma cacao
Thecc1EG025515 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 33165055-33167054 Theobroma cacao
Thecc1EG025515 5.0kb upstream 5.0kb upstream 21157 true scaffold_5: 33143898-33165054 Theobroma cacao
Thecc1EG025515 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 33143898-33148897 Theobroma cacao
Thecc1EG025515 5.0kb downstream 5.0kb downstream 21157 true scaffold_5: 33148898-33170054 Theobroma cacao
Thecc1EG025515 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 33165055-33170054 Theobroma cacao
Thecc1EG025515 10.0kb upstream 10.0kb upstream 26157 true scaffold_5: 33138898-33165054 Theobroma cacao
Thecc1EG025515 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 33138898-33148897 Theobroma cacao
Thecc1EG025515 10.0kb downstream 10.0kb downstream 26157 true scaffold_5: 33148898-33175054 Theobroma cacao
Thecc1EG025515 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 33165055-33175054 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833026 5264 Brassicales-Malvales View MSA
124338779 5266 SBM View MSA
124241301 5268 Malvidae View MSA
124065348 5270 Rosid View MSA
123736538 5271 Pentapetalae View MSA
122789208 5272 Eudicot View MSA
122042538 5273 Angiosperm View MSA
121345004 5274 Embryophyte View MSA
123424617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain