Gene : Pavir.2NG205700 P. virgatum v4.1
Defline:  (1 of 3) K04716 - sphingosine-1-phosphate phosphatase 1 (SGPP1) Genomic Order:  2362
Name:  ? Pavir.2NG205700 Secondary Identifier:  ? PAC:37581862
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRIGLSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG205700 0.5kb upstream 0.5kb upstream 3678 true Chr02N: 54239983-54243660 Panicum virgatum
Pavir.2NG205700 0.5kb upstream 0.5kb upstream 500 false Chr02N: 54243161-54243660 Panicum virgatum
Pavir.2NG205700 0.5kb downstream 0.5kb downstream 3678 true Chr02N: 54239483-54243160 Panicum virgatum
Pavir.2NG205700 0.5kb downstream 0.5kb downstream 500 false Chr02N: 54239483-54239982 Panicum virgatum
Pavir.2NG205700 1.0kb upstream 1.0kb upstream 4178 true Chr02N: 54239983-54244160 Panicum virgatum
Pavir.2NG205700 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 54243161-54244160 Panicum virgatum
Pavir.2NG205700 1.0kb downstream 1.0kb downstream 4178 true Chr02N: 54238983-54243160 Panicum virgatum
Pavir.2NG205700 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 54238983-54239982 Panicum virgatum
Pavir.2NG205700 2.0kb upstream 2.0kb upstream 5178 true Chr02N: 54239983-54245160 Panicum virgatum
Pavir.2NG205700 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 54243161-54245160 Panicum virgatum
Pavir.2NG205700 2.0kb downstream 2.0kb downstream 5178 true Chr02N: 54237983-54243160 Panicum virgatum
Pavir.2NG205700 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 54237983-54239982 Panicum virgatum
Pavir.2NG205700 5.0kb upstream 5.0kb upstream 8178 true Chr02N: 54239983-54248160 Panicum virgatum
Pavir.2NG205700 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 54243161-54248160 Panicum virgatum
Pavir.2NG205700 5.0kb downstream 5.0kb downstream 8178 true Chr02N: 54234983-54243160 Panicum virgatum
Pavir.2NG205700 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 54234983-54239982 Panicum virgatum
Pavir.2NG205700 10.0kb upstream 10.0kb upstream 13178 true Chr02N: 54239983-54253160 Panicum virgatum
Pavir.2NG205700 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 54243161-54253160 Panicum virgatum
Pavir.2NG205700 10.0kb downstream 10.0kb downstream 13178 true Chr02N: 54229983-54243160 Panicum virgatum
Pavir.2NG205700 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 54229983-54239982 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197916 5267 Panicoideae View MSA
124580296 5269 Grass View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain