Gene : Pavir.6NG147800 P. virgatum v4.1
Defline:  (1 of 2) PTHR21145//PTHR21145:SF2 - CHORISMATE MUTASE // SUBFAMILY NOT NAMED Genomic Order:  1936
Name:  ? Pavir.6NG147800 Secondary Identifier:  ? PAC:37649175
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-3461 Panicum virgatum pathologic  
Pvirgatum PWY-3462 Panicum virgatum pathologic  
Pvirgatum PWY-3481 Panicum virgatum pathologic  
Pvirgatum PWY-6120 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG147800 0.5kb upstream 0.5kb upstream 3262 true Chr06N: 57148904-57152165 Panicum virgatum
Pavir.6NG147800 0.5kb upstream 0.5kb upstream 500 false Chr06N: 57151666-57152165 Panicum virgatum
Pavir.6NG147800 0.5kb downstream 0.5kb downstream 3262 true Chr06N: 57148404-57151665 Panicum virgatum
Pavir.6NG147800 0.5kb downstream 0.5kb downstream 500 false Chr06N: 57148404-57148903 Panicum virgatum
Pavir.6NG147800 1.0kb upstream 1.0kb upstream 3762 true Chr06N: 57148904-57152665 Panicum virgatum
Pavir.6NG147800 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 57151666-57152665 Panicum virgatum
Pavir.6NG147800 1.0kb downstream 1.0kb downstream 3762 true Chr06N: 57147904-57151665 Panicum virgatum
Pavir.6NG147800 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 57147904-57148903 Panicum virgatum
Pavir.6NG147800 2.0kb upstream 2.0kb upstream 4762 true Chr06N: 57148904-57153665 Panicum virgatum
Pavir.6NG147800 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 57151666-57153665 Panicum virgatum
Pavir.6NG147800 2.0kb downstream 2.0kb downstream 4762 true Chr06N: 57146904-57151665 Panicum virgatum
Pavir.6NG147800 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 57146904-57148903 Panicum virgatum
Pavir.6NG147800 5.0kb upstream 5.0kb upstream 7762 true Chr06N: 57148904-57156665 Panicum virgatum
Pavir.6NG147800 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 57151666-57156665 Panicum virgatum
Pavir.6NG147800 5.0kb downstream 5.0kb downstream 7762 true Chr06N: 57143904-57151665 Panicum virgatum
Pavir.6NG147800 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 57143904-57148903 Panicum virgatum
Pavir.6NG147800 10.0kb upstream 10.0kb upstream 12762 true Chr06N: 57148904-57161665 Panicum virgatum
Pavir.6NG147800 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 57151666-57161665 Panicum virgatum
Pavir.6NG147800 10.0kb downstream 10.0kb downstream 12762 true Chr06N: 57138904-57151665 Panicum virgatum
Pavir.6NG147800 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 57138904-57148903 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185812 5267 Panicoideae View MSA
124580660 5269 Grass View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain