Gene : Pavir.2NG159000 P. virgatum v4.1
Defline:  (1 of 6) K02291 - phytoene synthase (crtB) Genomic Order:  1462
Name:  ? Pavir.2NG159000 Secondary Identifier:  ? PAC:37581257
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CAROTENOID-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6475 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG159000 0.5kb upstream 0.5kb upstream 3664 true Chr02N: 26641446-26645109 Panicum virgatum
Pavir.2NG159000 0.5kb upstream 0.5kb upstream 500 false Chr02N: 26644610-26645109 Panicum virgatum
Pavir.2NG159000 0.5kb downstream 0.5kb downstream 3664 true Chr02N: 26640946-26644609 Panicum virgatum
Pavir.2NG159000 0.5kb downstream 0.5kb downstream 500 false Chr02N: 26640946-26641445 Panicum virgatum
Pavir.2NG159000 1.0kb upstream 1.0kb upstream 4164 true Chr02N: 26641446-26645609 Panicum virgatum
Pavir.2NG159000 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 26644610-26645609 Panicum virgatum
Pavir.2NG159000 1.0kb downstream 1.0kb downstream 4164 true Chr02N: 26640446-26644609 Panicum virgatum
Pavir.2NG159000 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 26640446-26641445 Panicum virgatum
Pavir.2NG159000 2.0kb upstream 2.0kb upstream 5164 true Chr02N: 26641446-26646609 Panicum virgatum
Pavir.2NG159000 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 26644610-26646609 Panicum virgatum
Pavir.2NG159000 2.0kb downstream 2.0kb downstream 5164 true Chr02N: 26639446-26644609 Panicum virgatum
Pavir.2NG159000 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 26639446-26641445 Panicum virgatum
Pavir.2NG159000 5.0kb upstream 5.0kb upstream 8164 true Chr02N: 26641446-26649609 Panicum virgatum
Pavir.2NG159000 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 26644610-26649609 Panicum virgatum
Pavir.2NG159000 5.0kb downstream 5.0kb downstream 8164 true Chr02N: 26636446-26644609 Panicum virgatum
Pavir.2NG159000 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 26636446-26641445 Panicum virgatum
Pavir.2NG159000 10.0kb upstream 10.0kb upstream 13164 true Chr02N: 26641446-26654609 Panicum virgatum
Pavir.2NG159000 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 26644610-26654609 Panicum virgatum
Pavir.2NG159000 10.0kb downstream 10.0kb downstream 13164 true Chr02N: 26631446-26644609 Panicum virgatum
Pavir.2NG159000 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 26631446-26641445 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993341 5273 Angiosperm View MSA
122176655 5267 Panicoideae View MSA
124577513 5269 Grass View MSA
121263628 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain