Gene : Thecc1EG025472 T. cacao v1.1
Defline:  (1 of 1) PTHR12649//PTHR12649:SF11 - PEPTIDYL-TRNA HYDROLASE 2 // PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL Genomic Order:  2146
Name:  ? Thecc1EG025472 Secondary Identifier:  ? PAC:27422437
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025472 0.5kb upstream 0.5kb upstream 5455 true scaffold_5: 32955594-32961048 Theobroma cacao
Thecc1EG025472 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 32955594-32956093 Theobroma cacao
Thecc1EG025472 0.5kb downstream 0.5kb downstream 5455 true scaffold_5: 32956094-32961548 Theobroma cacao
Thecc1EG025472 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 32961049-32961548 Theobroma cacao
Thecc1EG025472 1.0kb upstream 1.0kb upstream 5955 true scaffold_5: 32955094-32961048 Theobroma cacao
Thecc1EG025472 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 32955094-32956093 Theobroma cacao
Thecc1EG025472 1.0kb downstream 1.0kb downstream 5955 true scaffold_5: 32956094-32962048 Theobroma cacao
Thecc1EG025472 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 32961049-32962048 Theobroma cacao
Thecc1EG025472 2.0kb upstream 2.0kb upstream 6955 true scaffold_5: 32954094-32961048 Theobroma cacao
Thecc1EG025472 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 32954094-32956093 Theobroma cacao
Thecc1EG025472 2.0kb downstream 2.0kb downstream 6955 true scaffold_5: 32956094-32963048 Theobroma cacao
Thecc1EG025472 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 32961049-32963048 Theobroma cacao
Thecc1EG025472 5.0kb upstream 5.0kb upstream 9955 true scaffold_5: 32951094-32961048 Theobroma cacao
Thecc1EG025472 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 32951094-32956093 Theobroma cacao
Thecc1EG025472 5.0kb downstream 5.0kb downstream 9955 true scaffold_5: 32956094-32966048 Theobroma cacao
Thecc1EG025472 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 32961049-32966048 Theobroma cacao
Thecc1EG025472 10.0kb upstream 10.0kb upstream 14955 true scaffold_5: 32946094-32961048 Theobroma cacao
Thecc1EG025472 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 32946094-32956093 Theobroma cacao
Thecc1EG025472 10.0kb downstream 10.0kb downstream 14955 true scaffold_5: 32956094-32971048 Theobroma cacao
Thecc1EG025472 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 32961049-32971048 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041458 5273 Angiosperm View MSA
123838005 5264 Brassicales-Malvales View MSA
124345604 5266 SBM View MSA
124240247 5268 Malvidae View MSA
124065431 5270 Rosid View MSA
123745404 5271 Pentapetalae View MSA
122792467 5272 Eudicot View MSA
121347943 5274 Embryophyte View MSA
123426949 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain