Gene : Pavir.2NG254800 P. virgatum v4.1
Defline:  (1 of 8) K07407 - alpha-galactosidase (E3.2.1.22B, galA, rafA) Genomic Order:  1914
Name:  ? Pavir.2NG254800 Secondary Identifier:  ? PAC:37583212
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY0-1301 Panicum virgatum pathologic  
Pvirgatum PWY-6527 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG254800 0.5kb upstream 0.5kb upstream 5299 true Chr02N: 40209813-40215111 Panicum virgatum
Pavir.2NG254800 0.5kb upstream 0.5kb upstream 500 false Chr02N: 40209813-40210312 Panicum virgatum
Pavir.2NG254800 0.5kb downstream 0.5kb downstream 5299 true Chr02N: 40210313-40215611 Panicum virgatum
Pavir.2NG254800 0.5kb downstream 0.5kb downstream 500 false Chr02N: 40215112-40215611 Panicum virgatum
Pavir.2NG254800 1.0kb upstream 1.0kb upstream 5799 true Chr02N: 40209313-40215111 Panicum virgatum
Pavir.2NG254800 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 40209313-40210312 Panicum virgatum
Pavir.2NG254800 1.0kb downstream 1.0kb downstream 5799 true Chr02N: 40210313-40216111 Panicum virgatum
Pavir.2NG254800 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 40215112-40216111 Panicum virgatum
Pavir.2NG254800 2.0kb upstream 2.0kb upstream 6799 true Chr02N: 40208313-40215111 Panicum virgatum
Pavir.2NG254800 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 40208313-40210312 Panicum virgatum
Pavir.2NG254800 2.0kb downstream 2.0kb downstream 6799 true Chr02N: 40210313-40217111 Panicum virgatum
Pavir.2NG254800 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 40215112-40217111 Panicum virgatum
Pavir.2NG254800 5.0kb upstream 5.0kb upstream 9799 true Chr02N: 40205313-40215111 Panicum virgatum
Pavir.2NG254800 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 40205313-40210312 Panicum virgatum
Pavir.2NG254800 5.0kb downstream 5.0kb downstream 9799 true Chr02N: 40210313-40220111 Panicum virgatum
Pavir.2NG254800 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 40215112-40220111 Panicum virgatum
Pavir.2NG254800 10.0kb upstream 10.0kb upstream 14799 true Chr02N: 40200313-40215111 Panicum virgatum
Pavir.2NG254800 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 40200313-40210312 Panicum virgatum
Pavir.2NG254800 10.0kb downstream 10.0kb downstream 14799 true Chr02N: 40210313-40225111 Panicum virgatum
Pavir.2NG254800 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 40215112-40225111 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192526 5267 Panicoideae View MSA
124466351 5269 Grass View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain