Gene : Pavir.2NG254700 P. virgatum v4.1
Defline:  (1 of 8) K07407 - alpha-galactosidase (E3.2.1.22B, galA, rafA) Genomic Order:  1915
Name:  ? Pavir.2NG254700 Secondary Identifier:  ? PAC:37585679
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY0-1301 Panicum virgatum pathologic  
Pvirgatum PWY-6527 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG254700 0.5kb upstream 0.5kb upstream 4373 true Chr02N: 40217898-40222270 Panicum virgatum
Pavir.2NG254700 0.5kb upstream 0.5kb upstream 500 false Chr02N: 40217898-40218397 Panicum virgatum
Pavir.2NG254700 0.5kb downstream 0.5kb downstream 4373 true Chr02N: 40218398-40222770 Panicum virgatum
Pavir.2NG254700 0.5kb downstream 0.5kb downstream 500 false Chr02N: 40222271-40222770 Panicum virgatum
Pavir.2NG254700 1.0kb upstream 1.0kb upstream 4873 true Chr02N: 40217398-40222270 Panicum virgatum
Pavir.2NG254700 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 40217398-40218397 Panicum virgatum
Pavir.2NG254700 1.0kb downstream 1.0kb downstream 4873 true Chr02N: 40218398-40223270 Panicum virgatum
Pavir.2NG254700 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 40222271-40223270 Panicum virgatum
Pavir.2NG254700 2.0kb upstream 2.0kb upstream 5873 true Chr02N: 40216398-40222270 Panicum virgatum
Pavir.2NG254700 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 40216398-40218397 Panicum virgatum
Pavir.2NG254700 2.0kb downstream 2.0kb downstream 5873 true Chr02N: 40218398-40224270 Panicum virgatum
Pavir.2NG254700 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 40222271-40224270 Panicum virgatum
Pavir.2NG254700 5.0kb upstream 5.0kb upstream 8873 true Chr02N: 40213398-40222270 Panicum virgatum
Pavir.2NG254700 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 40213398-40218397 Panicum virgatum
Pavir.2NG254700 5.0kb downstream 5.0kb downstream 8873 true Chr02N: 40218398-40227270 Panicum virgatum
Pavir.2NG254700 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 40222271-40227270 Panicum virgatum
Pavir.2NG254700 10.0kb upstream 10.0kb upstream 13873 true Chr02N: 40208398-40222270 Panicum virgatum
Pavir.2NG254700 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 40208398-40218397 Panicum virgatum
Pavir.2NG254700 10.0kb downstream 10.0kb downstream 13873 true Chr02N: 40218398-40232270 Panicum virgatum
Pavir.2NG254700 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 40222271-40232270 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192526 5267 Panicoideae View MSA
124466351 5269 Grass View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain