Gene : Pavir.2NG245500 P. virgatum v4.1
Defline:  (1 of 3) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  1996
Name:  ? Pavir.2NG245500 Secondary Identifier:  ? PAC:37584926
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum HISTSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG245500 0.5kb upstream 0.5kb upstream 6379 true Chr02N: 43129774-43136152 Panicum virgatum
Pavir.2NG245500 0.5kb upstream 0.5kb upstream 500 false Chr02N: 43135653-43136152 Panicum virgatum
Pavir.2NG245500 0.5kb downstream 0.5kb downstream 6379 true Chr02N: 43129274-43135652 Panicum virgatum
Pavir.2NG245500 0.5kb downstream 0.5kb downstream 500 false Chr02N: 43129274-43129773 Panicum virgatum
Pavir.2NG245500 1.0kb upstream 1.0kb upstream 6879 true Chr02N: 43129774-43136652 Panicum virgatum
Pavir.2NG245500 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 43135653-43136652 Panicum virgatum
Pavir.2NG245500 1.0kb downstream 1.0kb downstream 6879 true Chr02N: 43128774-43135652 Panicum virgatum
Pavir.2NG245500 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 43128774-43129773 Panicum virgatum
Pavir.2NG245500 2.0kb upstream 2.0kb upstream 7879 true Chr02N: 43129774-43137652 Panicum virgatum
Pavir.2NG245500 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 43135653-43137652 Panicum virgatum
Pavir.2NG245500 2.0kb downstream 2.0kb downstream 7879 true Chr02N: 43127774-43135652 Panicum virgatum
Pavir.2NG245500 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 43127774-43129773 Panicum virgatum
Pavir.2NG245500 5.0kb upstream 5.0kb upstream 10879 true Chr02N: 43129774-43140652 Panicum virgatum
Pavir.2NG245500 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 43135653-43140652 Panicum virgatum
Pavir.2NG245500 5.0kb downstream 5.0kb downstream 10879 true Chr02N: 43124774-43135652 Panicum virgatum
Pavir.2NG245500 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 43124774-43129773 Panicum virgatum
Pavir.2NG245500 10.0kb upstream 10.0kb upstream 15879 true Chr02N: 43129774-43145652 Panicum virgatum
Pavir.2NG245500 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 43135653-43145652 Panicum virgatum
Pavir.2NG245500 10.0kb downstream 10.0kb downstream 15879 true Chr02N: 43119774-43135652 Panicum virgatum
Pavir.2NG245500 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 43119774-43129773 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122194677 5267 Panicoideae View MSA
124584289 5269 Grass View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain