Gene : Pavir.2NG220400 P. virgatum v4.1
Defline:  (1 of 2) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  2223
Name:  ? Pavir.2NG220400 Secondary Identifier:  ? PAC:37580685
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG220400 0.5kb upstream 0.5kb upstream 8724 true Chr02N: 51891565-51900288 Panicum virgatum
Pavir.2NG220400 0.5kb upstream 0.5kb upstream 500 false Chr02N: 51899789-51900288 Panicum virgatum
Pavir.2NG220400 0.5kb downstream 0.5kb downstream 8724 true Chr02N: 51891065-51899788 Panicum virgatum
Pavir.2NG220400 0.5kb downstream 0.5kb downstream 500 false Chr02N: 51891065-51891564 Panicum virgatum
Pavir.2NG220400 1.0kb upstream 1.0kb upstream 9224 true Chr02N: 51891565-51900788 Panicum virgatum
Pavir.2NG220400 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 51899789-51900788 Panicum virgatum
Pavir.2NG220400 1.0kb downstream 1.0kb downstream 9224 true Chr02N: 51890565-51899788 Panicum virgatum
Pavir.2NG220400 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 51890565-51891564 Panicum virgatum
Pavir.2NG220400 2.0kb upstream 2.0kb upstream 10224 true Chr02N: 51891565-51901788 Panicum virgatum
Pavir.2NG220400 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 51899789-51901788 Panicum virgatum
Pavir.2NG220400 2.0kb downstream 2.0kb downstream 10224 true Chr02N: 51889565-51899788 Panicum virgatum
Pavir.2NG220400 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 51889565-51891564 Panicum virgatum
Pavir.2NG220400 5.0kb upstream 5.0kb upstream 13224 true Chr02N: 51891565-51904788 Panicum virgatum
Pavir.2NG220400 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 51899789-51904788 Panicum virgatum
Pavir.2NG220400 5.0kb downstream 5.0kb downstream 13224 true Chr02N: 51886565-51899788 Panicum virgatum
Pavir.2NG220400 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 51886565-51891564 Panicum virgatum
Pavir.2NG220400 10.0kb upstream 10.0kb upstream 18224 true Chr02N: 51891565-51909788 Panicum virgatum
Pavir.2NG220400 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 51899789-51909788 Panicum virgatum
Pavir.2NG220400 10.0kb downstream 10.0kb downstream 18224 true Chr02N: 51881565-51899788 Panicum virgatum
Pavir.2NG220400 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 51881565-51891564 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122080631 5267 Panicoideae Singleton cluster - no MSA
124583154 5269 Grass View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain