Gene : Pavir.2NG285500 P. virgatum v4.1
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  1640
Name:  ? Pavir.2NG285500 Secondary Identifier:  ? PAC:37588308
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG285500 0.5kb upstream 0.5kb upstream 1954 true Chr02N: 34008414-34010367 Panicum virgatum
Pavir.2NG285500 0.5kb upstream 0.5kb upstream 500 false Chr02N: 34009868-34010367 Panicum virgatum
Pavir.2NG285500 0.5kb downstream 0.5kb downstream 1954 true Chr02N: 34007914-34009867 Panicum virgatum
Pavir.2NG285500 0.5kb downstream 0.5kb downstream 500 false Chr02N: 34007914-34008413 Panicum virgatum
Pavir.2NG285500 1.0kb upstream 1.0kb upstream 2454 true Chr02N: 34008414-34010867 Panicum virgatum
Pavir.2NG285500 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 34009868-34010867 Panicum virgatum
Pavir.2NG285500 1.0kb downstream 1.0kb downstream 2454 true Chr02N: 34007414-34009867 Panicum virgatum
Pavir.2NG285500 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 34007414-34008413 Panicum virgatum
Pavir.2NG285500 2.0kb upstream 2.0kb upstream 3454 true Chr02N: 34008414-34011867 Panicum virgatum
Pavir.2NG285500 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 34009868-34011867 Panicum virgatum
Pavir.2NG285500 2.0kb downstream 2.0kb downstream 3454 true Chr02N: 34006414-34009867 Panicum virgatum
Pavir.2NG285500 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 34006414-34008413 Panicum virgatum
Pavir.2NG285500 5.0kb upstream 5.0kb upstream 6454 true Chr02N: 34008414-34014867 Panicum virgatum
Pavir.2NG285500 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 34009868-34014867 Panicum virgatum
Pavir.2NG285500 5.0kb downstream 5.0kb downstream 6454 true Chr02N: 34003414-34009867 Panicum virgatum
Pavir.2NG285500 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 34003414-34008413 Panicum virgatum
Pavir.2NG285500 10.0kb upstream 10.0kb upstream 11454 true Chr02N: 34008414-34019867 Panicum virgatum
Pavir.2NG285500 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 34009868-34019867 Panicum virgatum
Pavir.2NG285500 10.0kb downstream 10.0kb downstream 11454 true Chr02N: 33998414-34009867 Panicum virgatum
Pavir.2NG285500 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 33998414-34008413 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186074 5267 Panicoideae View MSA
124577325 5269 Grass View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain