Gene : Thecc1EG025393 T. cacao v1.1

Defline:  (1 of 1) PTHR21262//PTHR21262:SF7 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  2098
Name:  ? Thecc1EG025393 Secondary Identifier:  ? PAC:27423561

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025393 0.5kb upstream 0.5kb upstream 28845 true scaffold_5: 32286684-32315528 Theobroma cacao
Thecc1EG025393 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 32315029-32315528 Theobroma cacao
Thecc1EG025393 0.5kb downstream 0.5kb downstream 28845 true scaffold_5: 32286184-32315028 Theobroma cacao
Thecc1EG025393 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 32286184-32286683 Theobroma cacao
Thecc1EG025393 1.0kb upstream 1.0kb upstream 29345 true scaffold_5: 32286684-32316028 Theobroma cacao
Thecc1EG025393 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 32315029-32316028 Theobroma cacao
Thecc1EG025393 1.0kb downstream 1.0kb downstream 29345 true scaffold_5: 32285684-32315028 Theobroma cacao
Thecc1EG025393 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 32285684-32286683 Theobroma cacao
Thecc1EG025393 2.0kb upstream 2.0kb upstream 30345 true scaffold_5: 32286684-32317028 Theobroma cacao
Thecc1EG025393 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 32315029-32317028 Theobroma cacao
Thecc1EG025393 2.0kb downstream 2.0kb downstream 30345 true scaffold_5: 32284684-32315028 Theobroma cacao
Thecc1EG025393 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 32284684-32286683 Theobroma cacao
Thecc1EG025393 5.0kb upstream 5.0kb upstream 33345 true scaffold_5: 32286684-32320028 Theobroma cacao
Thecc1EG025393 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 32315029-32320028 Theobroma cacao
Thecc1EG025393 5.0kb downstream 5.0kb downstream 33345 true scaffold_5: 32281684-32315028 Theobroma cacao
Thecc1EG025393 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 32281684-32286683 Theobroma cacao
Thecc1EG025393 10.0kb upstream 10.0kb upstream 38345 true scaffold_5: 32286684-32325028 Theobroma cacao
Thecc1EG025393 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 32315029-32325028 Theobroma cacao
Thecc1EG025393 10.0kb downstream 10.0kb downstream 38345 true scaffold_5: 32276684-32315028 Theobroma cacao
Thecc1EG025393 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 32276684-32286683 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824184 5264 Brassicales-Malvales View MSA
124349323 5266 SBM View MSA
124245675 5268 Malvidae View MSA
124070563 5270 Rosid View MSA
123742389 5271 Pentapetalae View MSA
122794554 5272 Eudicot View MSA
122048422 5273 Angiosperm View MSA
121348424 5274 Embryophyte View MSA
123425764 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain