Gene : Pavir.2NG330100 P. virgatum v4.1
Defline:  (1 of 38) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  2692
Name:  ? Pavir.2NG330100 Secondary Identifier:  ? PAC:37581554
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5936 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG330100 0.5kb upstream 0.5kb upstream 4480 true Chr02N: 58470274-58474753 Panicum virgatum
Pavir.2NG330100 0.5kb upstream 0.5kb upstream 500 false Chr02N: 58474254-58474753 Panicum virgatum
Pavir.2NG330100 0.5kb downstream 0.5kb downstream 4480 true Chr02N: 58469774-58474253 Panicum virgatum
Pavir.2NG330100 0.5kb downstream 0.5kb downstream 500 false Chr02N: 58469774-58470273 Panicum virgatum
Pavir.2NG330100 1.0kb upstream 1.0kb upstream 4980 true Chr02N: 58470274-58475253 Panicum virgatum
Pavir.2NG330100 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 58474254-58475253 Panicum virgatum
Pavir.2NG330100 1.0kb downstream 1.0kb downstream 4980 true Chr02N: 58469274-58474253 Panicum virgatum
Pavir.2NG330100 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 58469274-58470273 Panicum virgatum
Pavir.2NG330100 2.0kb upstream 2.0kb upstream 5980 true Chr02N: 58470274-58476253 Panicum virgatum
Pavir.2NG330100 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 58474254-58476253 Panicum virgatum
Pavir.2NG330100 2.0kb downstream 2.0kb downstream 5980 true Chr02N: 58468274-58474253 Panicum virgatum
Pavir.2NG330100 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 58468274-58470273 Panicum virgatum
Pavir.2NG330100 5.0kb upstream 5.0kb upstream 8980 true Chr02N: 58470274-58479253 Panicum virgatum
Pavir.2NG330100 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 58474254-58479253 Panicum virgatum
Pavir.2NG330100 5.0kb downstream 5.0kb downstream 8980 true Chr02N: 58465274-58474253 Panicum virgatum
Pavir.2NG330100 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 58465274-58470273 Panicum virgatum
Pavir.2NG330100 10.0kb upstream 10.0kb upstream 13980 true Chr02N: 58470274-58484253 Panicum virgatum
Pavir.2NG330100 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 58474254-58484253 Panicum virgatum
Pavir.2NG330100 10.0kb downstream 10.0kb downstream 13980 true Chr02N: 58460274-58474253 Panicum virgatum
Pavir.2NG330100 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 58460274-58470273 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
122193763 5267 Panicoideae View MSA
124576790 5269 Grass View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain