Gene : Thecc1EG025384 T. cacao v1.1
Defline:  (1 of 4) PTHR10644:SF2 - CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 Genomic Order:  2092
Name:  ? Thecc1EG025384 Secondary Identifier:  ? PAC:27424887
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025384 0.5kb upstream 0.5kb upstream 5042 true scaffold_5: 32240739-32245780 Theobroma cacao
Thecc1EG025384 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 32240739-32241238 Theobroma cacao
Thecc1EG025384 0.5kb downstream 0.5kb downstream 5042 true scaffold_5: 32241239-32246280 Theobroma cacao
Thecc1EG025384 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 32245781-32246280 Theobroma cacao
Thecc1EG025384 1.0kb upstream 1.0kb upstream 5542 true scaffold_5: 32240239-32245780 Theobroma cacao
Thecc1EG025384 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 32240239-32241238 Theobroma cacao
Thecc1EG025384 1.0kb downstream 1.0kb downstream 5542 true scaffold_5: 32241239-32246780 Theobroma cacao
Thecc1EG025384 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 32245781-32246780 Theobroma cacao
Thecc1EG025384 2.0kb upstream 2.0kb upstream 6542 true scaffold_5: 32239239-32245780 Theobroma cacao
Thecc1EG025384 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 32239239-32241238 Theobroma cacao
Thecc1EG025384 2.0kb downstream 2.0kb downstream 6542 true scaffold_5: 32241239-32247780 Theobroma cacao
Thecc1EG025384 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 32245781-32247780 Theobroma cacao
Thecc1EG025384 5.0kb upstream 5.0kb upstream 9542 true scaffold_5: 32236239-32245780 Theobroma cacao
Thecc1EG025384 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 32236239-32241238 Theobroma cacao
Thecc1EG025384 5.0kb downstream 5.0kb downstream 9542 true scaffold_5: 32241239-32250780 Theobroma cacao
Thecc1EG025384 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 32245781-32250780 Theobroma cacao
Thecc1EG025384 10.0kb upstream 10.0kb upstream 14542 true scaffold_5: 32231239-32245780 Theobroma cacao
Thecc1EG025384 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 32231239-32241238 Theobroma cacao
Thecc1EG025384 10.0kb downstream 10.0kb downstream 14542 true scaffold_5: 32241239-32255780 Theobroma cacao
Thecc1EG025384 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 32245781-32255780 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121524852 5273 Angiosperm View MSA
123823728 5264 Brassicales-Malvales View MSA
124319791 5266 SBM View MSA
124168305 5268 Malvidae View MSA
123891723 5270 Rosid View MSA
123473986 5271 Pentapetalae View MSA
122509268 5272 Eudicot View MSA
120797633 5274 Embryophyte View MSA
122839213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain