Gene : Pavir.2NG298600 P. virgatum v4.1
Defline:  (1 of 14) PTHR10353//PTHR10353:SF48 - GLYCOSYL HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  2922
Name:  ? Pavir.2NG298600 Secondary Identifier:  ? PAC:37586281
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5176 Panicum virgatum pathologic  
Pvirgatum PWY-7089 Panicum virgatum pathologic  
Pvirgatum PWY-7091 Panicum virgatum pathologic  
Pvirgatum PWY-7092 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG298600 0.5kb upstream 0.5kb upstream 1884 true Chr02N: 62581364-62583247 Panicum virgatum
Pavir.2NG298600 0.5kb upstream 0.5kb upstream 500 false Chr02N: 62581364-62581863 Panicum virgatum
Pavir.2NG298600 0.5kb downstream 0.5kb downstream 1884 true Chr02N: 62581864-62583747 Panicum virgatum
Pavir.2NG298600 0.5kb downstream 0.5kb downstream 500 false Chr02N: 62583248-62583747 Panicum virgatum
Pavir.2NG298600 1.0kb upstream 1.0kb upstream 2384 true Chr02N: 62580864-62583247 Panicum virgatum
Pavir.2NG298600 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 62580864-62581863 Panicum virgatum
Pavir.2NG298600 1.0kb downstream 1.0kb downstream 2384 true Chr02N: 62581864-62584247 Panicum virgatum
Pavir.2NG298600 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 62583248-62584247 Panicum virgatum
Pavir.2NG298600 2.0kb upstream 2.0kb upstream 3384 true Chr02N: 62579864-62583247 Panicum virgatum
Pavir.2NG298600 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 62579864-62581863 Panicum virgatum
Pavir.2NG298600 2.0kb downstream 2.0kb downstream 3384 true Chr02N: 62581864-62585247 Panicum virgatum
Pavir.2NG298600 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 62583248-62585247 Panicum virgatum
Pavir.2NG298600 5.0kb upstream 5.0kb upstream 6384 true Chr02N: 62576864-62583247 Panicum virgatum
Pavir.2NG298600 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 62576864-62581863 Panicum virgatum
Pavir.2NG298600 5.0kb downstream 5.0kb downstream 6384 true Chr02N: 62581864-62588247 Panicum virgatum
Pavir.2NG298600 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 62583248-62588247 Panicum virgatum
Pavir.2NG298600 10.0kb upstream 10.0kb upstream 11384 true Chr02N: 62571864-62583247 Panicum virgatum
Pavir.2NG298600 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 62571864-62581863 Panicum virgatum
Pavir.2NG298600 10.0kb downstream 10.0kb downstream 11384 true Chr02N: 62581864-62593247 Panicum virgatum
Pavir.2NG298600 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 62583248-62593247 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030265 5273 Angiosperm View MSA
122082042 5267 Panicoideae Singleton cluster - no MSA
124380342 5269 Grass Singleton cluster - no MSA
121299464 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain