Gene : Thecc1EG025771 T. cacao v1.1

Defline:  (1 of 1) PTHR23180:SF202 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED Genomic Order:  2382
Name:  ? Thecc1EG025771 Secondary Identifier:  ? PAC:27424627

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025771 0.5kb upstream 0.5kb upstream 8214 true scaffold_5: 34564849-34573062 Theobroma cacao
Thecc1EG025771 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34564849-34565348 Theobroma cacao
Thecc1EG025771 0.5kb downstream 0.5kb downstream 8214 true scaffold_5: 34565349-34573562 Theobroma cacao
Thecc1EG025771 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34573063-34573562 Theobroma cacao
Thecc1EG025771 1.0kb upstream 1.0kb upstream 8714 true scaffold_5: 34564349-34573062 Theobroma cacao
Thecc1EG025771 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34564349-34565348 Theobroma cacao
Thecc1EG025771 1.0kb downstream 1.0kb downstream 8714 true scaffold_5: 34565349-34574062 Theobroma cacao
Thecc1EG025771 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34573063-34574062 Theobroma cacao
Thecc1EG025771 2.0kb upstream 2.0kb upstream 9714 true scaffold_5: 34563349-34573062 Theobroma cacao
Thecc1EG025771 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34563349-34565348 Theobroma cacao
Thecc1EG025771 2.0kb downstream 2.0kb downstream 9714 true scaffold_5: 34565349-34575062 Theobroma cacao
Thecc1EG025771 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34573063-34575062 Theobroma cacao
Thecc1EG025771 5.0kb upstream 5.0kb upstream 12714 true scaffold_5: 34560349-34573062 Theobroma cacao
Thecc1EG025771 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34560349-34565348 Theobroma cacao
Thecc1EG025771 5.0kb downstream 5.0kb downstream 12714 true scaffold_5: 34565349-34578062 Theobroma cacao
Thecc1EG025771 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34573063-34578062 Theobroma cacao
Thecc1EG025771 10.0kb upstream 10.0kb upstream 17714 true scaffold_5: 34555349-34573062 Theobroma cacao
Thecc1EG025771 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34555349-34565348 Theobroma cacao
Thecc1EG025771 10.0kb downstream 10.0kb downstream 17714 true scaffold_5: 34565349-34583062 Theobroma cacao
Thecc1EG025771 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34573063-34583062 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831924 5264 Brassicales-Malvales View MSA
124340841 5266 SBM View MSA
124242883 5268 Malvidae View MSA
124069758 5270 Rosid View MSA
123751217 5271 Pentapetalae View MSA
122791146 5272 Eudicot View MSA
122043746 5273 Angiosperm View MSA
121351567 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain