Gene : Thecc1EG025766 T. cacao v1.1
Defline:  (1 of 5) PTHR11206//PTHR11206:SF154 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  2377
Name:  ? Thecc1EG025766 Secondary Identifier:  ? PAC:27420705
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025766 0.5kb upstream 0.5kb upstream 10059 true scaffold_5: 34516811-34526869 Theobroma cacao
Thecc1EG025766 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34526370-34526869 Theobroma cacao
Thecc1EG025766 0.5kb downstream 0.5kb downstream 10059 true scaffold_5: 34516311-34526369 Theobroma cacao
Thecc1EG025766 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34516311-34516810 Theobroma cacao
Thecc1EG025766 1.0kb upstream 1.0kb upstream 10559 true scaffold_5: 34516811-34527369 Theobroma cacao
Thecc1EG025766 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34526370-34527369 Theobroma cacao
Thecc1EG025766 1.0kb downstream 1.0kb downstream 10559 true scaffold_5: 34515811-34526369 Theobroma cacao
Thecc1EG025766 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34515811-34516810 Theobroma cacao
Thecc1EG025766 2.0kb upstream 2.0kb upstream 11559 true scaffold_5: 34516811-34528369 Theobroma cacao
Thecc1EG025766 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34526370-34528369 Theobroma cacao
Thecc1EG025766 2.0kb downstream 2.0kb downstream 11559 true scaffold_5: 34514811-34526369 Theobroma cacao
Thecc1EG025766 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34514811-34516810 Theobroma cacao
Thecc1EG025766 5.0kb upstream 5.0kb upstream 14559 true scaffold_5: 34516811-34531369 Theobroma cacao
Thecc1EG025766 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34526370-34531369 Theobroma cacao
Thecc1EG025766 5.0kb downstream 5.0kb downstream 14559 true scaffold_5: 34511811-34526369 Theobroma cacao
Thecc1EG025766 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34511811-34516810 Theobroma cacao
Thecc1EG025766 10.0kb upstream 10.0kb upstream 19559 true scaffold_5: 34516811-34536369 Theobroma cacao
Thecc1EG025766 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34526370-34536369 Theobroma cacao
Thecc1EG025766 10.0kb downstream 10.0kb downstream 19559 true scaffold_5: 34506811-34526369 Theobroma cacao
Thecc1EG025766 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34506811-34516810 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825657 5264 Brassicales-Malvales View MSA
124348659 5266 SBM View MSA
124249162 5268 Malvidae View MSA
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain