Gene : Thecc1EG025764 T. cacao v1.1
Defline:  (1 of 5) PTHR11206//PTHR11206:SF154 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  2375
Name:  ? Thecc1EG025764 Secondary Identifier:  ? PAC:27423946
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025764 0.5kb upstream 0.5kb upstream 3493 true scaffold_5: 34511325-34514817 Theobroma cacao
Thecc1EG025764 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34514318-34514817 Theobroma cacao
Thecc1EG025764 0.5kb downstream 0.5kb downstream 3493 true scaffold_5: 34510825-34514317 Theobroma cacao
Thecc1EG025764 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34510825-34511324 Theobroma cacao
Thecc1EG025764 1.0kb upstream 1.0kb upstream 3993 true scaffold_5: 34511325-34515317 Theobroma cacao
Thecc1EG025764 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34514318-34515317 Theobroma cacao
Thecc1EG025764 1.0kb downstream 1.0kb downstream 3993 true scaffold_5: 34510325-34514317 Theobroma cacao
Thecc1EG025764 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34510325-34511324 Theobroma cacao
Thecc1EG025764 2.0kb upstream 2.0kb upstream 4993 true scaffold_5: 34511325-34516317 Theobroma cacao
Thecc1EG025764 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34514318-34516317 Theobroma cacao
Thecc1EG025764 2.0kb downstream 2.0kb downstream 4993 true scaffold_5: 34509325-34514317 Theobroma cacao
Thecc1EG025764 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34509325-34511324 Theobroma cacao
Thecc1EG025764 5.0kb upstream 5.0kb upstream 7993 true scaffold_5: 34511325-34519317 Theobroma cacao
Thecc1EG025764 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34514318-34519317 Theobroma cacao
Thecc1EG025764 5.0kb downstream 5.0kb downstream 7993 true scaffold_5: 34506325-34514317 Theobroma cacao
Thecc1EG025764 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34506325-34511324 Theobroma cacao
Thecc1EG025764 10.0kb upstream 10.0kb upstream 12993 true scaffold_5: 34511325-34524317 Theobroma cacao
Thecc1EG025764 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34514318-34524317 Theobroma cacao
Thecc1EG025764 10.0kb downstream 10.0kb downstream 12993 true scaffold_5: 34501325-34514317 Theobroma cacao
Thecc1EG025764 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34501325-34511324 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820091 5264 Brassicales-Malvales Singleton cluster - no MSA
124316314 5266 SBM Singleton cluster - no MSA
124249162 5268 Malvidae View MSA
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain