Gene : Thecc1EG025743 T. cacao v1.1
Defline:  (1 of 1) PTHR22812//PTHR22812:SF80 - CHROMOBOX PROTEIN // RE36324P Genomic Order:  2357
Name:  ? Thecc1EG025743 Secondary Identifier:  ? PAC:27423921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025743 0.5kb upstream 0.5kb upstream 5357 true scaffold_5: 34403896-34409252 Theobroma cacao
Thecc1EG025743 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34403896-34404395 Theobroma cacao
Thecc1EG025743 0.5kb downstream 0.5kb downstream 5357 true scaffold_5: 34404396-34409752 Theobroma cacao
Thecc1EG025743 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34409253-34409752 Theobroma cacao
Thecc1EG025743 1.0kb upstream 1.0kb upstream 5857 true scaffold_5: 34403396-34409252 Theobroma cacao
Thecc1EG025743 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34403396-34404395 Theobroma cacao
Thecc1EG025743 1.0kb downstream 1.0kb downstream 5857 true scaffold_5: 34404396-34410252 Theobroma cacao
Thecc1EG025743 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34409253-34410252 Theobroma cacao
Thecc1EG025743 2.0kb upstream 2.0kb upstream 6857 true scaffold_5: 34402396-34409252 Theobroma cacao
Thecc1EG025743 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34402396-34404395 Theobroma cacao
Thecc1EG025743 2.0kb downstream 2.0kb downstream 6857 true scaffold_5: 34404396-34411252 Theobroma cacao
Thecc1EG025743 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34409253-34411252 Theobroma cacao
Thecc1EG025743 5.0kb upstream 5.0kb upstream 9857 true scaffold_5: 34399396-34409252 Theobroma cacao
Thecc1EG025743 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34399396-34404395 Theobroma cacao
Thecc1EG025743 5.0kb downstream 5.0kb downstream 9857 true scaffold_5: 34404396-34414252 Theobroma cacao
Thecc1EG025743 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34409253-34414252 Theobroma cacao
Thecc1EG025743 10.0kb upstream 10.0kb upstream 14857 true scaffold_5: 34394396-34409252 Theobroma cacao
Thecc1EG025743 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34394396-34404395 Theobroma cacao
Thecc1EG025743 10.0kb downstream 10.0kb downstream 14857 true scaffold_5: 34404396-34419252 Theobroma cacao
Thecc1EG025743 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34409253-34419252 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829190 5264 Brassicales-Malvales View MSA
124345638 5266 SBM View MSA
124238746 5268 Malvidae View MSA
124068397 5270 Rosid View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain