Gene : Thecc1EG025742 T. cacao v1.1

Defline:  (1 of 1) KOG3294 - WW domain binding protein WBP-2, contains GRAM domain Genomic Order:  2356
Name:  ? Thecc1EG025742 Secondary Identifier:  ? PAC:27424613

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025742 0.5kb upstream 0.5kb upstream 2555 true scaffold_5: 34397446-34400000 Theobroma cacao
Thecc1EG025742 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34397446-34397945 Theobroma cacao
Thecc1EG025742 0.5kb downstream 0.5kb downstream 2555 true scaffold_5: 34397946-34400500 Theobroma cacao
Thecc1EG025742 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34400001-34400500 Theobroma cacao
Thecc1EG025742 1.0kb upstream 1.0kb upstream 3055 true scaffold_5: 34396946-34400000 Theobroma cacao
Thecc1EG025742 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34396946-34397945 Theobroma cacao
Thecc1EG025742 1.0kb downstream 1.0kb downstream 3055 true scaffold_5: 34397946-34401000 Theobroma cacao
Thecc1EG025742 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34400001-34401000 Theobroma cacao
Thecc1EG025742 2.0kb upstream 2.0kb upstream 4055 true scaffold_5: 34395946-34400000 Theobroma cacao
Thecc1EG025742 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34395946-34397945 Theobroma cacao
Thecc1EG025742 2.0kb downstream 2.0kb downstream 4055 true scaffold_5: 34397946-34402000 Theobroma cacao
Thecc1EG025742 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34400001-34402000 Theobroma cacao
Thecc1EG025742 5.0kb upstream 5.0kb upstream 7055 true scaffold_5: 34392946-34400000 Theobroma cacao
Thecc1EG025742 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34392946-34397945 Theobroma cacao
Thecc1EG025742 5.0kb downstream 5.0kb downstream 7055 true scaffold_5: 34397946-34405000 Theobroma cacao
Thecc1EG025742 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34400001-34405000 Theobroma cacao
Thecc1EG025742 10.0kb upstream 10.0kb upstream 12055 true scaffold_5: 34387946-34400000 Theobroma cacao
Thecc1EG025742 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34387946-34397945 Theobroma cacao
Thecc1EG025742 10.0kb downstream 10.0kb downstream 12055 true scaffold_5: 34397946-34410000 Theobroma cacao
Thecc1EG025742 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34400001-34410000 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121522095 5273 Angiosperm Singleton cluster - no MSA
123819973 5264 Brassicales-Malvales Singleton cluster - no MSA
124316200 5266 SBM Singleton cluster - no MSA
124165043 5268 Malvidae Singleton cluster - no MSA
123888755 5270 Rosid Singleton cluster - no MSA
123471168 5271 Pentapetalae Singleton cluster - no MSA
122506458 5272 Eudicot Singleton cluster - no MSA
121350995 5274 Embryophyte View MSA
123424898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain