Gene : Thecc1EG025727 T. cacao v1.1

Defline:  (1 of 2) PTHR21576:SF7 - MAJOR FACILITATOR PROTEIN-RELATED Genomic Order:  2343
Name:  ? Thecc1EG025727 Secondary Identifier:  ? PAC:27425239

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025727 0.5kb upstream 0.5kb upstream 5383 true scaffold_5: 34322614-34327996 Theobroma cacao
Thecc1EG025727 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34327497-34327996 Theobroma cacao
Thecc1EG025727 0.5kb downstream 0.5kb downstream 5383 true scaffold_5: 34322114-34327496 Theobroma cacao
Thecc1EG025727 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34322114-34322613 Theobroma cacao
Thecc1EG025727 1.0kb upstream 1.0kb upstream 5883 true scaffold_5: 34322614-34328496 Theobroma cacao
Thecc1EG025727 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34327497-34328496 Theobroma cacao
Thecc1EG025727 1.0kb downstream 1.0kb downstream 5883 true scaffold_5: 34321614-34327496 Theobroma cacao
Thecc1EG025727 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34321614-34322613 Theobroma cacao
Thecc1EG025727 2.0kb upstream 2.0kb upstream 6883 true scaffold_5: 34322614-34329496 Theobroma cacao
Thecc1EG025727 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34327497-34329496 Theobroma cacao
Thecc1EG025727 2.0kb downstream 2.0kb downstream 6883 true scaffold_5: 34320614-34327496 Theobroma cacao
Thecc1EG025727 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34320614-34322613 Theobroma cacao
Thecc1EG025727 5.0kb upstream 5.0kb upstream 9883 true scaffold_5: 34322614-34332496 Theobroma cacao
Thecc1EG025727 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34327497-34332496 Theobroma cacao
Thecc1EG025727 5.0kb downstream 5.0kb downstream 9883 true scaffold_5: 34317614-34327496 Theobroma cacao
Thecc1EG025727 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34317614-34322613 Theobroma cacao
Thecc1EG025727 10.0kb upstream 10.0kb upstream 14883 true scaffold_5: 34322614-34337496 Theobroma cacao
Thecc1EG025727 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34327497-34337496 Theobroma cacao
Thecc1EG025727 10.0kb downstream 10.0kb downstream 14883 true scaffold_5: 34312614-34327496 Theobroma cacao
Thecc1EG025727 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34312614-34322613 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041179 5273 Angiosperm View MSA
123825325 5264 Brassicales-Malvales View MSA
124349379 5266 SBM View MSA
124247018 5268 Malvidae View MSA
124070185 5270 Rosid View MSA
123747845 5271 Pentapetalae View MSA
122792896 5272 Eudicot View MSA
123429121 5275 Viridiplantae View MSA
121309810 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain