Gene : Pavir.2NG464400 P. virgatum v4.1
Defline:  (1 of 2) 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase Genomic Order:  4246
Name:  ? Pavir.2NG464400 Secondary Identifier:  ? PAC:37582749
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG464400 0.5kb upstream 0.5kb upstream 3528 true Chr02N: 83380182-83383709 Panicum virgatum
Pavir.2NG464400 0.5kb upstream 0.5kb upstream 500 false Chr02N: 83383210-83383709 Panicum virgatum
Pavir.2NG464400 0.5kb downstream 0.5kb downstream 3528 true Chr02N: 83379682-83383209 Panicum virgatum
Pavir.2NG464400 0.5kb downstream 0.5kb downstream 500 false Chr02N: 83379682-83380181 Panicum virgatum
Pavir.2NG464400 1.0kb upstream 1.0kb upstream 4028 true Chr02N: 83380182-83384209 Panicum virgatum
Pavir.2NG464400 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 83383210-83384209 Panicum virgatum
Pavir.2NG464400 1.0kb downstream 1.0kb downstream 4028 true Chr02N: 83379182-83383209 Panicum virgatum
Pavir.2NG464400 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 83379182-83380181 Panicum virgatum
Pavir.2NG464400 2.0kb upstream 2.0kb upstream 5028 true Chr02N: 83380182-83385209 Panicum virgatum
Pavir.2NG464400 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 83383210-83385209 Panicum virgatum
Pavir.2NG464400 2.0kb downstream 2.0kb downstream 5028 true Chr02N: 83378182-83383209 Panicum virgatum
Pavir.2NG464400 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 83378182-83380181 Panicum virgatum
Pavir.2NG464400 5.0kb upstream 5.0kb upstream 8028 true Chr02N: 83380182-83388209 Panicum virgatum
Pavir.2NG464400 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 83383210-83388209 Panicum virgatum
Pavir.2NG464400 5.0kb downstream 5.0kb downstream 8028 true Chr02N: 83375182-83383209 Panicum virgatum
Pavir.2NG464400 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 83375182-83380181 Panicum virgatum
Pavir.2NG464400 10.0kb upstream 10.0kb upstream 13028 true Chr02N: 83380182-83393209 Panicum virgatum
Pavir.2NG464400 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 83383210-83393209 Panicum virgatum
Pavir.2NG464400 10.0kb downstream 10.0kb downstream 13028 true Chr02N: 83370182-83383209 Panicum virgatum
Pavir.2NG464400 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 83370182-83380181 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122081109 5267 Panicoideae Singleton cluster - no MSA
124379504 5269 Grass Singleton cluster - no MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain