Gene : Pavir.2NG534100 P. virgatum v4.1
Defline:  (1 of 4) K04718 - sphingosine kinase (SPHK) Genomic Order:  4882
Name:  ? Pavir.2NG534100 Secondary Identifier:  ? PAC:37586485
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5129 Panicum virgatum pathologic  
Pvirgatum PWY-6483 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG534100 0.5kb upstream 0.5kb upstream 4767 true Chr02N: 91727852-91732618 Panicum virgatum
Pavir.2NG534100 0.5kb upstream 0.5kb upstream 500 false Chr02N: 91727852-91728351 Panicum virgatum
Pavir.2NG534100 0.5kb downstream 0.5kb downstream 4767 true Chr02N: 91728352-91733118 Panicum virgatum
Pavir.2NG534100 0.5kb downstream 0.5kb downstream 500 false Chr02N: 91732619-91733118 Panicum virgatum
Pavir.2NG534100 1.0kb upstream 1.0kb upstream 5267 true Chr02N: 91727352-91732618 Panicum virgatum
Pavir.2NG534100 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 91727352-91728351 Panicum virgatum
Pavir.2NG534100 1.0kb downstream 1.0kb downstream 5267 true Chr02N: 91728352-91733618 Panicum virgatum
Pavir.2NG534100 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 91732619-91733618 Panicum virgatum
Pavir.2NG534100 2.0kb upstream 2.0kb upstream 6267 true Chr02N: 91726352-91732618 Panicum virgatum
Pavir.2NG534100 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 91726352-91728351 Panicum virgatum
Pavir.2NG534100 2.0kb downstream 2.0kb downstream 6267 true Chr02N: 91728352-91734618 Panicum virgatum
Pavir.2NG534100 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 91732619-91734618 Panicum virgatum
Pavir.2NG534100 5.0kb upstream 5.0kb upstream 9267 true Chr02N: 91723352-91732618 Panicum virgatum
Pavir.2NG534100 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 91723352-91728351 Panicum virgatum
Pavir.2NG534100 5.0kb downstream 5.0kb downstream 9267 true Chr02N: 91728352-91737618 Panicum virgatum
Pavir.2NG534100 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 91732619-91737618 Panicum virgatum
Pavir.2NG534100 10.0kb upstream 10.0kb upstream 14267 true Chr02N: 91718352-91732618 Panicum virgatum
Pavir.2NG534100 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 91718352-91728351 Panicum virgatum
Pavir.2NG534100 10.0kb downstream 10.0kb downstream 14267 true Chr02N: 91728352-91742618 Panicum virgatum
Pavir.2NG534100 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 91732619-91742618 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184562 5267 Panicoideae View MSA
124586280 5269 Grass View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain