Gene : Thecc1EG025684 T. cacao v1.1

Defline:  (1 of 2) PTHR31956//PTHR31956:SF1 - FAMILY NOT NAMED // NON-SPECIFIC PHOSPHOLIPASE C3-RELATED Genomic Order:  2311
Name:  ? Thecc1EG025684 Secondary Identifier:  ? PAC:27422734

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025684 0.5kb upstream 0.5kb upstream 4594 true scaffold_5: 34102884-34107477 Theobroma cacao
Thecc1EG025684 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34106978-34107477 Theobroma cacao
Thecc1EG025684 0.5kb downstream 0.5kb downstream 4594 true scaffold_5: 34102384-34106977 Theobroma cacao
Thecc1EG025684 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34102384-34102883 Theobroma cacao
Thecc1EG025684 1.0kb upstream 1.0kb upstream 5094 true scaffold_5: 34102884-34107977 Theobroma cacao
Thecc1EG025684 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34106978-34107977 Theobroma cacao
Thecc1EG025684 1.0kb downstream 1.0kb downstream 5094 true scaffold_5: 34101884-34106977 Theobroma cacao
Thecc1EG025684 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34101884-34102883 Theobroma cacao
Thecc1EG025684 2.0kb upstream 2.0kb upstream 6094 true scaffold_5: 34102884-34108977 Theobroma cacao
Thecc1EG025684 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34106978-34108977 Theobroma cacao
Thecc1EG025684 2.0kb downstream 2.0kb downstream 6094 true scaffold_5: 34100884-34106977 Theobroma cacao
Thecc1EG025684 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34100884-34102883 Theobroma cacao
Thecc1EG025684 5.0kb upstream 5.0kb upstream 9094 true scaffold_5: 34102884-34111977 Theobroma cacao
Thecc1EG025684 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34106978-34111977 Theobroma cacao
Thecc1EG025684 5.0kb downstream 5.0kb downstream 9094 true scaffold_5: 34097884-34106977 Theobroma cacao
Thecc1EG025684 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34097884-34102883 Theobroma cacao
Thecc1EG025684 10.0kb upstream 10.0kb upstream 14094 true scaffold_5: 34102884-34116977 Theobroma cacao
Thecc1EG025684 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34106978-34116977 Theobroma cacao
Thecc1EG025684 10.0kb downstream 10.0kb downstream 14094 true scaffold_5: 34092884-34106977 Theobroma cacao
Thecc1EG025684 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34092884-34102883 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828507 5264 Brassicales-Malvales View MSA
124340349 5266 SBM View MSA
124244843 5268 Malvidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain