Gene : Thecc1EG025670 T. cacao v1.1
Defline:  (1 of 8) PTHR11945//PTHR11945:SF183 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  2299
Name:  ? Thecc1EG025670 Secondary Identifier:  ? PAC:27422778
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025670 0.5kb upstream 0.5kb upstream 5203 true scaffold_5: 34039290-34044492 Theobroma cacao
Thecc1EG025670 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 34043993-34044492 Theobroma cacao
Thecc1EG025670 0.5kb downstream 0.5kb downstream 5203 true scaffold_5: 34038790-34043992 Theobroma cacao
Thecc1EG025670 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 34038790-34039289 Theobroma cacao
Thecc1EG025670 1.0kb upstream 1.0kb upstream 5703 true scaffold_5: 34039290-34044992 Theobroma cacao
Thecc1EG025670 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 34043993-34044992 Theobroma cacao
Thecc1EG025670 1.0kb downstream 1.0kb downstream 5703 true scaffold_5: 34038290-34043992 Theobroma cacao
Thecc1EG025670 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 34038290-34039289 Theobroma cacao
Thecc1EG025670 2.0kb upstream 2.0kb upstream 6703 true scaffold_5: 34039290-34045992 Theobroma cacao
Thecc1EG025670 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 34043993-34045992 Theobroma cacao
Thecc1EG025670 2.0kb downstream 2.0kb downstream 6703 true scaffold_5: 34037290-34043992 Theobroma cacao
Thecc1EG025670 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 34037290-34039289 Theobroma cacao
Thecc1EG025670 5.0kb upstream 5.0kb upstream 9703 true scaffold_5: 34039290-34048992 Theobroma cacao
Thecc1EG025670 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 34043993-34048992 Theobroma cacao
Thecc1EG025670 5.0kb downstream 5.0kb downstream 9703 true scaffold_5: 34034290-34043992 Theobroma cacao
Thecc1EG025670 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 34034290-34039289 Theobroma cacao
Thecc1EG025670 10.0kb upstream 10.0kb upstream 14703 true scaffold_5: 34039290-34053992 Theobroma cacao
Thecc1EG025670 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 34043993-34053992 Theobroma cacao
Thecc1EG025670 10.0kb downstream 10.0kb downstream 14703 true scaffold_5: 34029290-34043992 Theobroma cacao
Thecc1EG025670 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 34029290-34039289 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841143 5264 Brassicales-Malvales View MSA
124347196 5266 SBM View MSA
124250364 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain