Gene : Pavir.2NG588300 P. virgatum v4.1
Defline:  (1 of 7) K10206 - LL-diaminopimelate aminotransferase (E2.6.1.83) Genomic Order:  5380
Name:  ? Pavir.2NG588300 Secondary Identifier:  ? PAC:37584388
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5097 Panicum virgatum pathologic  
Pvirgatum PWY-724 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG588300 0.5kb upstream 0.5kb upstream 3803 true Chr02N: 97222978-97226780 Panicum virgatum
Pavir.2NG588300 0.5kb upstream 0.5kb upstream 500 false Chr02N: 97222978-97223477 Panicum virgatum
Pavir.2NG588300 0.5kb downstream 0.5kb downstream 3803 true Chr02N: 97223478-97227280 Panicum virgatum
Pavir.2NG588300 0.5kb downstream 0.5kb downstream 500 false Chr02N: 97226781-97227280 Panicum virgatum
Pavir.2NG588300 1.0kb upstream 1.0kb upstream 4303 true Chr02N: 97222478-97226780 Panicum virgatum
Pavir.2NG588300 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 97222478-97223477 Panicum virgatum
Pavir.2NG588300 1.0kb downstream 1.0kb downstream 4303 true Chr02N: 97223478-97227780 Panicum virgatum
Pavir.2NG588300 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 97226781-97227780 Panicum virgatum
Pavir.2NG588300 2.0kb upstream 2.0kb upstream 5303 true Chr02N: 97221478-97226780 Panicum virgatum
Pavir.2NG588300 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 97221478-97223477 Panicum virgatum
Pavir.2NG588300 2.0kb downstream 2.0kb downstream 5303 true Chr02N: 97223478-97228780 Panicum virgatum
Pavir.2NG588300 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 97226781-97228780 Panicum virgatum
Pavir.2NG588300 5.0kb upstream 5.0kb upstream 8303 true Chr02N: 97218478-97226780 Panicum virgatum
Pavir.2NG588300 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 97218478-97223477 Panicum virgatum
Pavir.2NG588300 5.0kb downstream 5.0kb downstream 8303 true Chr02N: 97223478-97231780 Panicum virgatum
Pavir.2NG588300 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 97226781-97231780 Panicum virgatum
Pavir.2NG588300 10.0kb upstream 10.0kb upstream 13303 true Chr02N: 97213478-97226780 Panicum virgatum
Pavir.2NG588300 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 97213478-97223477 Panicum virgatum
Pavir.2NG588300 10.0kb downstream 10.0kb downstream 13303 true Chr02N: 97223478-97236780 Panicum virgatum
Pavir.2NG588300 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 97226781-97236780 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194644 5267 Panicoideae View MSA
124590449 5269 Grass View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain